DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and cad

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_061512454.1 Gene:cad / 1279024 VectorBaseID:AGAMI1_005797 Length:415 Species:Anopheles gambiae


Alignment Length:299 Identity:69/299 - (23%)
Similarity:107/299 - (35%) Gaps:118/299 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 GLGPGGAVHPHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALS 300
            |:| .||:|     |.|...:|||||..:|                                   
Mosquito   107 GIG-SGALH-----LGQNPNLHHHHHHHHH----------------------------------- 130

  Fly   301 GNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNS 365
            ||.|||:..|..:|.:.:....:|..| :.:|     |:.:                        
Mosquito   131 GNNGGGNGGGGGSGGNAHDHLADGLHS-IPSP-----PITV------------------------ 165

  Fly   366 NDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTRYSDRPS 430
                    |.|..::.|||               ||:|        :|.:.|          ||:
Mosquito   166 --------SGSDMSSPGAP---------------TGSS--------SPQITP----------RPT 189

  Fly   431 SGRSPRARKPKKPATSSSAAGG-----GGGGVEKGEAADGGGVPEDK-RPRTAFSGTQLARLKHE 489
            ..:||.....|:...|....||     ....::.....:.||....| :.|..::..|...|:.|
Mosquito   190 PVKSPYEWMKKQSYQSQPNPGGLINICSAPSLQDFAPVESGGKTRTKDKYRVVYTDQQRLELEKE 254

  Fly   490 FNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKK 528
            |:..||:|.:|:.:|:..|.|:|.|:||||||:|||.:|
Mosquito   255 FHYTRYITIRRKAELAQNLQLSERQVKIWFQNRRAKDRK 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 24/56 (43%)
Engrail_1_C_sig 529..554 CDD:431338 69/299 (23%)
cadXP_061512454.1 None

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