DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and barhl2

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_012817899.1 Gene:barhl2 / 100493839 XenbaseID:XB-GENE-482777 Length:359 Species:Xenopus tropicalis


Alignment Length:358 Identity:88/358 - (24%)
Similarity:131/358 - (36%) Gaps:121/358 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 FSIDNILKADFGSRLPKIGALSGNI---------GGGSVSGSS---TGSSKNSGNTNGNRSPL-- 329
            |.||.|| ::.|:..|  |.|||:.         |.|.:|..|   |..|..|...:....|:  
 Frog     6 FGIDTIL-SNAGAVSP--GMLSGDFRDARATDFRGQGPLSPDSEIDTVGSSPSSPISVTMEPVDQ 67

  Fly   330 ----------------------KAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNSNDSNSTA 372
                                  ::|::...|    |..:|..:|.| |..:.:|..:|....:.|
 Frog    68 HRLVDSVHHSAQHLQHLHPTQQQSPQQQQPP----QLGSAPRTSTS-SFLIKDILGDSKPLAACA 127

  Fly   373 TSSSTTNTSGAPVDLVKSP---PPAAGAGAT---------------GASGKSGEDSGTPIVWPAW 419
            ..|:|          |.||   |...|.|::               |.:.|..||..|.|.... 
 Frog   128 PYSTT----------VPSPHHTPKHEGNGSSESFRPKLEQEMQDGKGKAEKIREDLHTDIKGHG- 181

  Fly   420 VYCTRYSDR--PSSGRSP--RARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSG 480
              .....||  .||..||  ||:||:|                               .|||||.
 Frog   182 --TKEEGDREITSSRESPPVRAKKPRK-------------------------------ARTAFSD 213

  Fly   481 TQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGL 545
            .||.:|:..|...:||:.:.|..|:..|.|.:.|:|.|:||:|.|.|:.:.    :.|:|:|:. 
 Frog   214 HQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTA----VGLELLAEA- 273

  Fly   546 YNHSTI------PLTREEEELQELQEAASAAAA 572
            .|:|.:      |.......|..:....:||||
 Frog   274 GNYSALQRMFPSPYFYHPSLLSSMDSTTAAAAA 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 22/55 (40%)
Engrail_1_C_sig 529..554 CDD:431338 6/30 (20%)
barhl2XP_012817899.1 Homeodomain 205..261 CDD:459649 23/86 (27%)

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