DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and barx2

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_002934925.2 Gene:barx2 / 100488405 XenbaseID:XB-GENE-852581 Length:288 Species:Xenopus tropicalis


Alignment Length:232 Identity:54/232 - (23%)
Similarity:86/232 - (37%) Gaps:71/232 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 CSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVY--CTR 424
            |:.|:........|..|........:|.:.|                .|..|::.|..:.  |||
 Frog    61 CTGSSSLRPYPLLSVITRQPNVVTHMVPTSP----------------SSHHPVLSPTHLSPGCTR 109

  Fly   425 YSDRPSS-----------GRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAF 478
             |:.|:|           ..:||.:||                               :|.||.|
 Frog   110 -SETPASEVHQSSESEHEQTTPRMKKP-------------------------------RRSRTIF 142

  Fly   479 SGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKK---SSGTKNPLALQL 540
            :..||..|:.:|.:.:||:...|..|:..|||.:.|:|.|:||:|.|.||   ..|.:.|    .
 Frog   143 TELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKIVLKGGQEAP----T 203

  Fly   541 MAQGLYNHSTIPLTRE---EEELQELQEAASAAAAKE 574
            ..:|....::||.:.|   ||:|.:|.:.......:|
 Frog   204 KPKGRPKKNSIPTSEEIEAEEKLNKLAQETETEVNEE 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 22/55 (40%)
Engrail_1_C_sig 529..554 CDD:431338 5/24 (21%)
barx2XP_002934925.2 Homeodomain 136..192 CDD:459649 22/55 (40%)

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