DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and hoxb5

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001094494.1 Gene:hoxb5 / 100113366 XenbaseID:XB-GENE-1005991 Length:258 Species:Xenopus tropicalis


Alignment Length:278 Identity:76/278 - (27%)
Similarity:109/278 - (39%) Gaps:76/278 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 IGALSGNIGGG---SVSGSSTGSSKNSGNTNGNRSPLKAPKKSG---KPLNLAQSNAAANSSLSF 354
            :.:.||....|   .|....||||.|...:....:....|...|   ..::|:.|.|||:||...
 Frog     6 VNSFSGRYPNGPDYHVLNYGTGSSSNLSGSYREAAGSMQPSAYGYNYNGMDLSVSRAAASSSHYG 70

  Fly   355 SSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVKS---------PPPAAGAGA-------TGAS 403
            .|:..     ..:|...|..|....|.. |:...||         |..:||:.|       |.||
 Frog    71 DSAFP-----GQESRFRANQSCPLATPD-PLPCAKSHKDELSPTDPATSAGSSAQFTEVEETSAS 129

  Fly   404 GKSGEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGV 468
            .::.|.|                       :||:..|.:....:|:.|..|        .||...
 Frog   130 SETEESS-----------------------TPRSSAPPRALQENSSPGAAG--------TDGQNP 163

  Fly   469 -----------------PEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIK 516
                             |:.||.|||::..|...|:.||:.|||||.:||.:::..|.|:|.|||
 Frog   164 QIFPWMRKLHINHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIK 228

  Fly   517 IWFQNKRAKLKKSSGTKN 534
            |||||:|.|.||.:..|:
 Frog   229 IWFQNRRMKWKKDNKLKS 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 29/55 (53%)
Engrail_1_C_sig 529..554 CDD:431338 1/6 (17%)
hoxb5NP_001094494.1 Homeodomain 184..240 CDD:459649 29/55 (53%)

Return to query results.
Submit another query.