DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and not

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001164669.1 Gene:not / 100038059 XenbaseID:XB-GENE-478518 Length:236 Species:Xenopus tropicalis


Alignment Length:167 Identity:50/167 - (29%)
Similarity:67/167 - (40%) Gaps:36/167 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   413 PIVW---PAWVYCTRYSDRPSSGRSPRARKP-KKPATSSSAAGGGGGGVEKGEAADGG------- 466
            |.||   |...|.:....:|.  |.||...| ..||....       |:......:|.       
 Frog    77 PPVWLIKPTVGYPSMAQQQPM--RMPRGECPCPDPACKER-------GLLYSHCPNGSMNPLSWR 132

  Fly   467 -GVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSS 530
             |..:.||.||.|:..||.||:.||.:.:|:....|..|:..|.|.|.|:|:||||:|.|.:|.|
 Frog   133 TGPCKMKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQS 197

  Fly   531 GTKNPLALQLMAQGLYNHSTIPL--------TREEEE 559
                   |:.....|.....||.        :||.||
 Frog   198 -------LEQKKAKLSQFGVIPADSSDHTDDSRETEE 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 25/55 (45%)
Engrail_1_C_sig 529..554 CDD:431338 5/32 (16%)
notNP_001164669.1 Homeodomain 139..195 CDD:459649 25/55 (45%)

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