DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and CG5246

DIOPT Version :10

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster


Alignment Length:279 Identity:95/279 - (34%)
Similarity:141/279 - (50%) Gaps:36/279 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILVVFLVLGVGCSLAD-PIYRNEEV-----HIPKLDGRIVGGQDTNITQYPHQIS-MRYRGNHRC 61
            :|:..||:...||... .|:|..::     |: |.:.|::||.|:.....|:|:| |...|.|.|
  Fly     5 VLISVLVILSQCSAKSVKIHRRHQLNHHLGHV-KPETRVIGGVDSPTGFAPYQVSIMNTFGEHVC 68

  Fly    62 GGTIYRSNQIISAAHCVNTLSGP-ENLTIVAGSSNIWFPTGPQQELEVREIIIH-----PKYRTL 120
            ||:|.....|::||||   :..| :.|.||.|:.:.   |.|..|..|....||     |.|.. 
  Fly    69 GGSIIAPQWILTAAHC---MEWPIQYLKIVTGTVDY---TRPGAEYLVDGSKIHCSHDKPAYHN- 126

  Fly   121 NNDYDAAILILDGDFEFNDAVQPIELAKE--RPDHDTPVTVTGWGTTSEGGTISDVLQEVSVNVV 183
                |.|::.......::|..|||:||.:  .|.....:|:||||:|...|..|..||::.:|.:
  Fly   127 ----DIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYI 187

  Fly   184 DNSNC----KNAYSIMLTSRMLCAGVNGGGKDACQGDSGGPLV-YNNTLLGIVSWGTGCAREKYP 243
            |:.||    :||.  .|:...:|. ....|:.:|.|||||||| .|.||:|:|:||..|| ..||
  Fly   188 DHDNCQSRVRNAN--WLSEGHVCT-FTQEGEGSCHGDSGGPLVDANQTLVGVVNWGEACA-IGYP 248

  Fly   244 GVYCSVPDVLDWLVETVAD 262
            .|:.||....||:.:.:.|
  Fly   249 DVFGSVAYYHDWIEQMMTD 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 36..259 CDD:238113 84/236 (36%)
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 84/235 (36%)

Return to query results.
Submit another query.