DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and CG8172

DIOPT Version :10

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001097235.2 Gene:CG8172 / 35905 FlyBaseID:FBgn0033362 Length:561 Species:Drosophila melanogaster


Alignment Length:253 Identity:88/253 - (34%)
Similarity:124/253 - (49%) Gaps:34/253 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RIVGGQDTNITQYPHQISMRYRG----NHRCGGTIYRSNQIISAAHCVNTLSGP-ENLTIVAGSS 94
            |||||..|....:|.|:::...|    ...|||.:..:..:|:|||||  .|.| .|:.|..|. 
  Fly   315 RIVGGHSTGFGSHPWQVALIKSGFLTRKLSCGGALISNRWVITAAHCV--ASTPNSNMKIRLGE- 376

  Fly    95 NIWFPTGPQQELEVREI-----IIHPKYRTLNNDYDAAILILDGDFEFNDAVQPIELAKERPDHD 154
              |...|.::.|...|.     .:||.|...:...|.|::.||.:..:...:.|:.|    |...
  Fly   377 --WDVRGQEERLNHEEYGIERKEVHPHYNPADFVNDVALIRLDRNVVYKQHIIPVCL----PPST 435

  Fly   155 TPV-----TVTGWGTTSEG-GTISDVLQEVSVNVVDNSNCKNAYSI-----MLTSRMLCAGVNGG 208
            |.:     ||.|||.|..| .|:..|||||.|.|:.|..|:..:..     .:....||||...|
  Fly   436 TKLTGKMATVAGWGRTRHGQSTVPSVLQEVDVEVISNDRCQRWFRAAGRREAIHDVFLCAGYKDG 500

  Fly   209 GKDACQGDSGGPLVY----NNTLLGIVSWGTGCAREKYPGVYCSVPDVLDWLVETVAD 262
            |:|:|||||||||..    ..||:|:||||.||.||..||||.::...:.|:.:.:|:
  Fly   501 GRDSCQGDSGGPLTLTMDGRKTLIGLVSWGIGCGREHLPGVYTNIQRFVPWINKVMAN 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 36..259 CDD:238113 86/247 (35%)
CG8172NP_001097235.2 Tryp_SPc 316..555 CDD:238113 86/247 (35%)

Return to query results.
Submit another query.