DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lambdaTry and plg

DIOPT Version :10

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_958880.2 Gene:plg / 322691 ZFINID:ZDB-GENE-030131-1411 Length:818 Species:Danio rerio


Alignment Length:282 Identity:98/282 - (34%)
Similarity:130/282 - (46%) Gaps:41/282 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLGVGCSLADPIYRNEEVHIPKLD---------------GRIVGGQDTNITQYPHQISMRYRGN- 58
            |.|..|...||..:.:...||..:               ||||||..:....:|.|||:|.||. 
Zfish   548 VNGPWCYTTDPSKKWDYCQIPDCESLKCGQPATKPKRCFGRIVGGCVSKPHSWPWQISLRTRGKI 612

  Fly    59 HRCGGTIYRSNQIISAAHCVNTLSGPENLTIVAGSSNIWFPTGPQQELEVREIIIHPKYRTLNND 123
            |.||||:.....:::||||:.....|....|:.|..........:||.:|.:||..|.      .
Zfish   613 HFCGGTLIDPQWVVTAAHCLERSDSPSAYKIMLGIHTERATESSKQERDVTKIIKGPA------G 671

  Fly   124 YDAAILILDGDFEFNDAVQPIELAKERPDHD------TPVTVTGWGTTSEGGTISDVLQEVSVNV 182
            .|.|:|.||.....||.|.|:.|    |:.|      |...|||||.|.:.|. ...|:|....|
Zfish   672 TDIALLKLDRPALINDKVSPVCL----PEKDYIVPSNTECYVTGWGETQDTGG-EGYLKETGFPV 731

  Fly   183 VDNSNCKNAYSIM---LTSRMLCAGVNGGGKDACQGDSGGPLV--YNNT--LLGIVSWGTGCARE 240
            ::|..| |..|.:   :....:|||...||.|:||||||||||  ..||  |.|:.|||.|||..
Zfish   732 IENKVC-NRPSFLNGRVKDHEMCAGNIEGGNDSCQGDSGGPLVCYAQNTFVLQGVTSWGLGCANA 795

  Fly   241 KYPGVYCSVPDVLDWLVETVAD 262
            ..||||..|...:||:..::.:
Zfish   796 MKPGVYTRVSKFVDWIERSIKE 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 36..259 CDD:238113 89/236 (38%)
plgNP_958880.2 PAN_AP_HGF 31..104 CDD:238532
KR 109..190 CDD:214527
KR 190..270 CDD:214527
KR 281..361 CDD:214527
Kringle 376..453 CDD:395005
KR 490..572 CDD:214527 7/23 (30%)
Tryp_SPc 589..813 CDD:238113 89/235 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.