DRSC/TRiP Functional Genomics Resources

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Protein Alignment lambdaTry and Klkb1

DIOPT Version :10

Sequence 1:NP_610673.1 Gene:lambdaTry / 36214 FlyBaseID:FBgn0043470 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_036857.2 Gene:Klkb1 / 25048 RGDID:67382 Length:638 Species:Rattus norvegicus


Alignment Length:246 Identity:93/246 - (37%)
Similarity:146/246 - (59%) Gaps:13/246 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KLDGRIVGGQDTNITQYPHQISMRYR---GNHRCGGTIYRSNQIISAAHCVNTLSGPENLTIVAG 92
            |::.|||||.::::.::|.|:|::.:   .||.|||:|.....|::||||.:.:..|:...|..|
  Rat   386 KINARIVGGTNSSLGEWPWQVSLQVKLVSQNHMCGGSIIGRQWILTAAHCFDGIPYPDVWRIYGG 450

  Fly    93 SSNIWFPTGPQQELEVREIIIHPKYRTLNNDYDAAILILDGDFEFNDAVQPIELAKERPDHDTPV 157
            ..|:...|.......::|:|||.||:.....||.|::.|.....:.:..:||.| ..:.|.:|..
  Rat   451 ILNLSEITNKTPFSSIKELIIHQKYKMSEGSYDIALIKLQTPLNYTEFQKPICL-PSKADTNTIY 514

  Fly   158 T---VTGWGTTSEGGTISDVLQEVSVNVVDNSNCKNAY-SIMLTSRMLCAGVNGGGKDACQGDSG 218
            |   |||||.|.|.|...::||:.::.:|.|..|:..| ..::|.:|:|||...||.|||:||||
  Rat   515 TNCWVTGWGYTKERGETQNILQKATIPLVPNEECQKKYRDYVITKQMICAGYKEGGIDACKGDSG 579

  Fly   219 GPLVYNNT----LLGIVSWGTGCAREKYPGVYCSVPDVLDWLVETV-ADKE 264
            ||||..::    |:||.|||.||||::.||||..|.:.:||::|.: :.||
  Rat   580 GPLVCKHSGRWQLVGITSWGEGCARKEQPGVYTKVAEYIDWILEKIQSSKE 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lambdaTryNP_610673.1 Tryp_SPc 36..259 CDD:238113 88/233 (38%)
Klkb1NP_036857.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519
Tryp_SPc 391..621 CDD:238113 87/230 (38%)
Blue background indicates that the domain is not in the aligned region.

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