DRSC/TRiP Functional Genomics Resources

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Protein Alignment: cag and Jrk

Sequence 1:NP_001260876.1 Gene:cag FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_032441.4 Gene:Jrk MGIID:106214 Length:557 Species:Mus musculus

Alignment Length:208 Identity:55/209 (26%)
Similarity:91/209 (44%) Gaps:28/209 (13%)


  Fly     4 GRVRKPRTSLTLEEKMEVIQSQERNKLSVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGELK-- 66
            |..|| |..|||:||:::....||.: |.:.|.:.:|:|.:...||..||..:.....|.:.:  
Mouse    12 GEKRK-RVVLTLKEKIDICTRLERGE-SRKALMQEYNVGMSTLYDIKAHKAQLLRFFASSDSRQA 74

  Fly    67 LNQMRRNPLSQRGAQIDEMCFDWFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSA-SSGWLEK 130
            |.| ||...:.:...:|.:.::||...|.|.||:||.|:.:|||....::..:.... |.|||.:
Mouse    75 LEQ-RRTLHTPKLEHLDRVLYEWFLVKRAEGIPVSGPMLIEKAKDFYKQMRLTEPCVFSGGWLWR 138

  Fly   131 WRKRHNVRYNDTGDSLDLQEFEAI---------LVKSEPISNKDDCDEPYPVTLIEPIYSTEEAM 186
            ::.||.::..|........:.:|.         |.....:|.             |.:||.:|..
Mouse   139 FKARHGIKKLDASSEKQAADHQAAEQFCGFFRSLAAEHGLSP-------------EQVYSADETG 190

  Fly   187 MQLARLKEFAKDD 199
            :....|...|.||
Mouse   191 LVWRCLPNSAPDD 203

Known Domains:


GeneSequenceDomainRegion External IDIdentity
cagNP_001260876.1 CENP-B_N 7..60 CDD:282122 18/53 (34%)
CENPB 78..141 CDD:197828 19/64 (30%)
JrkNP_032441.4 CENP-B_N 14..66 CDD:282122 18/54 (33%)
CENPB 83..147 CDD:197828 19/64 (30%)
DDE_1 213..382 CDD:281213
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG3105
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1343623at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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