DRSC/TRiP Functional Genomics Resources

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Protein Alignment cag and pogza

DIOPT Version :10

Sequence 1:NP_477207.1 Gene:cag / 36157 FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001201839.1 Gene:pogza / 100535215 ZFINID:ZDB-GENE-040914-76 Length:1277 Species:Danio rerio


Alignment Length:108 Identity:24/108 - (22%)
Similarity:47/108 - (43%) Gaps:19/108 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEEKMEVIQSQERNKLSVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGELKLNQMRRNPLSQRG 79
            |.|.::|::::.::.....|.....|....:.|::::   |:.|.||:.:|            :|
Zfish  1175 LTEVLDVLKAEPKHLFRSFDWILSTNESSEEPAELMR---SLTEALLASKL------------QG 1224

  Fly    80 AQIDEMCFDWFSRVRTEN--IPISGEMVRKK--AKQLAVELGH 118
            .:::|...:..|.|..|:  .|.|..:..||  .|...||..|
Zfish  1225 DKVEEQKAETSSVVSAESWPSPQSSILALKKIFEKDSDVETFH 1267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cagNP_477207.1 CENP-B_N 7..56 CDD:461229 6/40 (15%)
CENPB 78..141 CDD:197828 13/45 (29%)
pogzaNP_001201839.1 PHA03247 <48..345 CDD:223021
C2H2 Zn finger 432..453 CDD:275368
C2H2 Zn finger 462..483 CDD:275368
DDE_3 <1065..>1134 CDD:481203
Blue background indicates that the domain is not in the aligned region.

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