DRSC/TRiP Functional Genomics Resources

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Protein Alignment: cag and tigd3

Sequence 1:NP_001260876.1 Gene:cag FlyBaseID:FBgn0017414 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001128294.1 Gene:tigd3 XenbaseID:XB-GENE-6457180 Length:595 Species:Xenopus tropicalis

Alignment Length:137 Identity:37/138 (27%)
Similarity:75/138 (54%) Gaps:13/138 (9%)


  Fly     8 KPRTSLTLEEKMEVIQSQERNKLSVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGELKLNQMRR 72
            |.|...||.||:::::..::.|.|...:|:...:.::..:.::|:::.|.|       :.|| ..
 Frog    18 KKRRDSTLAEKVKILELLQQPKASQSSVARNLGLSQSTISRVMKNREEIME-------RWNQ-NE 74

  Fly    73 NPLSQRG-----AQIDEMCFDWFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSASSGWLEKWR 132
            ||..:|.     |::||...:|....:...:||||.::.::|:.:|.|:|...|..|:|||.:|:
 Frog    75 NPARKRNRPFKHAKVDEALLEWLLFAKANKLPISGPILMRRAEAIAKEIGCPQFKPSNGWLWRWK 139

  Fly   133 KRHNVRY 139
            :|:.:.|
 Frog   140 ERYRLFY 146

Known Domains:


GeneSequenceDomainRegion External IDIdentity
cagNP_001260876.1 CENP-B_N 7..60 CDD:282122 12/52 (23%)
CENPB 78..141 CDD:197828 21/68 (31%)
tigd3NP_001128294.1 HTH 18..68 CDD:304362 11/50 (22%)
CENPB 83..147 CDD:197828 20/65 (31%)
rve 248..421 CDD:304425
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1343623at2759
OrthoFinder 1 1.000 FOG0000794
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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