DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12343 and syf2

DIOPT Version :10

Sequence 1:NP_610617.1 Gene:CG12343 / 36143 FlyBaseID:FBgn0033556 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_596100.1 Gene:syf2 / 2540611 PomBaseID:SPBC3E7.13C Length:229 Species:Schizosaccharomyces pombe


Alignment Length:229 Identity:78/229 - (34%)
Similarity:128/229 - (55%) Gaps:23/229 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RKARLLDLHKKRQEARTDNHQ---EVVAEDARKK----LPKNWEARKRQAEWILADDKARAEAQA 71
            |:||:..|.|.|::.|..:|:   |||.|.:|.:    |.:..|.::.:||    ::.|:.|.:.
pombe     8 REARVEKLKKIREQMRKSSHENRKEVVQEHSRMRIDPALERRLERKRMEAE----EELAKIETEE 68

  Fly    72 AGKDYERLK----LLEVSAVDADRIEKKKKRKDNPDLGFSTYEAQTARQYNRLVKSMPARDLEKY 132
            .|.|:||.:    .:|.|.....|:.|||:...|  :.||.|.:|.::.|||.::.:.. |.|||
pombe    69 EGGDFERRRAWDWTIEESEKWDQRLRKKKQTIQN--VAFSDYHSQASKDYNRGIRDLKP-DYEKY 130

  Fly   133 ERQKEE-----LGDAFYGGAHTTLHSRTKDTPGAINKMVTDLEQQIERRKKYSRRRIYNDDADVD 192
            ::.|:|     ...|.|..|........|.....:.::|..:::|.:||.|.::||..:::..:.
pombe   131 DKDKKEEKSKSRSVALYDEAERLDWVSNKPDKEHVERLVESIKKQDQRRLKNTKRRGTDEEDHIT 195

  Fly   193 FINERNSKFNKKLDRFYSEHTAEIKQNLERGTAI 226
            ||||||.|||.||.||||::|.:||::||||||:
pombe   196 FINERNRKFNLKLQRFYSKYTKDIKEDLERGTAL 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12343NP_610617.1 SYF2 71..221 CDD:462400 53/158 (34%)
syf2NP_596100.1 SYF2 68..224 CDD:462400 53/158 (34%)

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