DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12898 and CG33772

DIOPT Version :10

Sequence 1:NP_610581.1 Gene:CG12898 / 36096 FlyBaseID:FBgn0033516 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_001027146.4 Gene:CG33772 / 3772205 FlyBaseID:FBgn0053772 Length:185 Species:Drosophila melanogaster


Alignment Length:156 Identity:32/156 - (20%)
Similarity:61/156 - (39%) Gaps:28/156 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FRKV---PNTKLLYTFR------------VVKLAPAFTIDITVKVVKTQRIFYKMENIKGCDFLN 76
            |||:   .|:|.:..:.            .:.||...|.|:.:|....||:....|:.:.. |..
  Fly    32 FRKIVANHNSKYISLYEAAISQDHTTINITLNLARNITADVWLKATIGQRVSKSGESYRDV-FTY 95

  Fly    77 NPLLFKMFGE----------VYNHLVVNGSYFKCPIKPKVYYLKN-EGTVSIIPSIHPPGRFQLS 130
            |..|.::.|.          :.|.|..:.....||::...||::| ......||.....|.|::.
  Fly    96 NVNLCQVMGRGKGISLINFWMNNILRQSNMPRNCPLREGNYYMRNIRSEKETIPRFIRSGSFRID 160

  Fly   131 MRVRMAESRAPFVMEMLWKYKIVRIK 156
            ..|.:.:..:..:.|.:: |..:::|
  Fly   161 SSVYVRDWNSVNLTETIF-YVDIKMK 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12898NP_610581.1 DUF1091 58..129 CDD:461928 18/81 (22%)
CG33772NP_001027146.4 DUF1091 89..182 CDD:472716 18/94 (19%)

Return to query results.
Submit another query.