DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18011 and CG6689

DIOPT Version :10

Sequence 1:NP_610559.1 Gene:CG18011 / 36068 FlyBaseID:FBgn0033491 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster


Alignment Length:749 Identity:142/749 - (18%)
Similarity:249/749 - (33%) Gaps:206/749 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 IPTREPSARIRNRAAAASNVTPDTSRSPEPPET--------PSTEDAVSKSEPKLVSKVADQEHF 187
            :|.....:..|::..||........|.|:.|:|        ..||:::....|            
  Fly     5 VPNCRNFSDCRSKRNAAQQQRLGFFRFPKCPDTFKAWLAFCGYTEESLKLKNP------------ 57

  Fly   188 SVLIQNILDEEEAVVEDETAVKEESSEAVQVTEETEAPGQIVILN--SEAVTDTNPDENVYIYEH 250
            .:.|::..||     :.|.::|.|...|   .:.|..||.:..:|  .|:.:|....|......:
  Fly    58 CICIEHFKDE-----DIEGSLKFEMGLA---KKRTLRPGAVPCVNKSQESGSDRARKERSQRRRN 114

  Fly   251 EDVMDPNLDNVKVKPISCSSRLVAQAEESQSDDDIDEGETSNVVLFNFVDIKEKDEVDNIPEYLA 315
            ::::               :.|:|:.|......:....|..:|.|...|.:    |:|.:     
  Fly   115 QELV---------------AELLAEEEAKLIHPEATSFEQDSVYLSETVTM----ELDPL----- 155

  Fly   316 TVVKTSFEKL-TFQWCTVCKHCSLKCPTFESLFSHLSKAHKSRRDVYECPIEGCNKELKGRKFLA 379
                :..||| ..|.|..|.:      .|.:.|        ..:|:::          .....|.
  Fly   156 ----SGEEKLEELQKCRTCYN------DFTADF--------RAKDLFD----------PANSVLL 192

  Fly   380 MHLVLL------HAPVAEIPIYGSCPECKLTFSNILQYNKHSCAHVIKKKRGFRSYCEMCSLEFP 438
            .|:.::      |.|  :.|.. .||.||......:.               ||..|....|:..
  Fly   193 FHIEVISGVWISHKP--DEPRL-MCPACKSALDQAID---------------FREMCISTELKLS 239

  Fly   439 SWKRFNFHSQFHLEKHRPRAC---FVCDYATTNIDELFQHLNYSHEPVGTLFCDLCDRTFRDPSV 500
            ..|......|...|...|.:.   .:.|...||::|:        |..|.               
  Fly   240 QAKPSTDEVQIEAENENPISSDHDLISDTENTNVEEI--------EDAGG--------------- 281

  Fly   501 FMEHNKSHANVSSTTYSCSECMANFESRGRLNGHMRAMHGSVISCELCSREFATEATYNIHMKKH 565
              :|.:..|  :|...:..|.:............:....|:.|..||..:...         |:.
  Fly   282 --DHVEDEA--TSDDQTSQEAVDEVAESPAAQDPLSVALGAKIFKELLDQYTG---------KEK 333

  Fly   566 LIIEKDVHVCSTCGLLSDSRETLLAHVNSVKTACFGSKIDVELLRDA--------YVCEYCSSYF 622
            ..:.|...:.|.    ..::|.........::|...:|.:..|:|.|        :||:.|...|
  Fly   334 ARLRKGAPIASK----PKAKEKAAGEQKPKRSANPKTKEERNLIRRAQLRAKPPNFVCDQCGQAF 394

  Fly   623 KEKDCLQAH--RDSGVHKDGVFLCQPCGKEFPHMKLYRHHLRNYQQLRSDSTHRRLE-------I 678
            :....|:.|  |.:....   :.|..|.|.|     |..::||        .|.|:.       .
  Fly   395 RMSHNLRIHMLRHTRTKN---YQCTECPKTF-----YDAYMRN--------MHIRIRHRGETPFA 443

  Fly   679 CVYYMCDQENCTESYVNWNSLYTHKRRTHESASKQAEK--------SSKSAQEWVCQFCLKECRS 735
            |.:       |:|::....:...|:...|.:|.:...|        ..:.:..:.|:.|.|...|
  Fly   444 CGF-------CSETFAYPGARQKHESEVHNAAPRLIVKRINPKPMPKPRESVRYQCKLCQKHYAS 501

  Fly   736 KMSLSVHVARSHNNDNV-TCPLCNSSYKSHDALAKHHAYWHE--PIECPECFKIVKNRRNYDTHV 797
            |.:|..|: :||.:.|. .|..|:.||...:.| |.|...||  |::|..|.|....|.....| 
  Fly   502 KYALGWHI-KSHTDANAYKCQRCSKSYSDPNKL-KRHEMTHEKRPLQCDVCLKGFYQRTRLREH- 563

  Fly   798 NVVHSNKKRYSCSVCQKGFYHKSEMEAH--QKLH 829
            .::|:.::.|.|.||...|.:|..|::|  .|:|
  Fly   564 ELIHTGERPYWCEVCNVNFRYKYNMKSHANSKMH 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18011NP_610559.1 C2H2 Zn finger 488..508 CDD:275368 1/19 (5%)
C2H2 Zn finger 518..538 CDD:275368 1/19 (5%)
C2H2 Zn finger 545..565 CDD:275368 3/19 (16%)
C2H2 Zn finger 575..596 CDD:275371 2/20 (10%)
C2H2 Zn finger 754..775 CDD:275368 7/20 (35%)
C2H2 Zn finger 780..801 CDD:275368 5/20 (25%)
C2H2 Zn finger 809..829 CDD:275368 8/21 (38%)
SUF4-like 852..>891 CDD:411020
C2H2 Zn finger 864..885 CDD:411020
C2H2 Zn finger 864..885 CDD:275368
C2H2 Zn finger 891..917 CDD:275368
CG6689NP_650051.1 THAP 2..94 CDD:214951 21/108 (19%)
zf-AD 166..241 CDD:462262 18/116 (16%)
zf-C2H2 385..407 CDD:395048 6/21 (29%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..436 CDD:275368 9/33 (27%)
C2H2 Zn finger 444..460 CDD:275368 3/22 (14%)
C2H2 Zn finger 492..512 CDD:275368 7/20 (35%)
C2H2 Zn finger 520..540 CDD:275368 7/20 (35%)
C2H2 Zn finger 547..567 CDD:275368 5/20 (25%)
zf-met 573..597 CDD:463736 9/23 (39%)
C2H2 Zn finger 575..591 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.

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