DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12917 and endod1l

DIOPT Version :10

Sequence 1:NP_610558.2 Gene:CG12917 / 36065 FlyBaseID:FBgn0033490 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_004919666.3 Gene:endod1l / 101731854 XenbaseID:XB-GENE-17329848 Length:280 Species:Xenopus tropicalis


Alignment Length:192 Identity:45/192 - (23%)
Similarity:76/192 - (39%) Gaps:45/192 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 QSDVYYKTFFPK------------------RP-------FVE-FVAD----EMFSPQEAAAYMKS 180
            |...||.|.:.:                  ||       ::| .:||    :|..|.::|...:|
 Frog    58 QGQYYYATLYHRDARVPIYSAYILEKSTTSRPDLSSTNWYLEPMLADLPQGDMLQPSQSAMQNES 122

  Fly   181 NIYFAFKCIYGDDQSYLQNANYLVINRGHMVASADFLFTDQMGSTFRYLNVVPQFKSINDGNWEK 245
            ......:.:..|    .:|:.:   :|||:..|.......|: |||.|.|:.||..:.|.|.|..
 Frog   123 EKVTDSQAVNDD----YRNSGF---SRGHLNPSGHHSAESQI-STFTYTNMAPQQGNFNSGTWNN 179

  Fly   246 IERWVRSQI-PKSSYFRVKSGGIGILTLPDTRGFLQSAFLAGSKIPVPEWTYKAVRDATGNG 306
            .|.:::..| |..|...|.:|.|...:.|.     :..:|.| ::.||.:.:.|.....|:|
 Frog   180 YETFLKDSILPGCSQTHVVTGIILSGSHPG-----EGVWLRG-RVNVPTFYWSAFCCVRGDG 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12917NP_610558.2 Endonuclease_NS 129..353 CDD:214889 45/192 (23%)
endod1lXP_004919666.3 Endonuclease_NS 61..261 CDD:214889 44/189 (23%)

Return to query results.
Submit another query.