DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdc2cAt

DIOPT Version :10

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_198758.2 Gene:cdc2cAt / 833938 AraportID:AT5G39420 Length:644 Species:Arabidopsis thaliana


Alignment Length:307 Identity:123/307 - (40%)
Similarity:190/307 - (61%) Gaps:6/307 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 FEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQ-EKDGLPISGLREIMILKQCHHENIVRLR 116
            |:||.::|:|:|..|:|||:..:.::||||||:.|. :.:.:.... |||:||::.:|.||::|.
plant   105 FQKLEKIGQGTYSSVFRAREVETGKMVALKKVKFDNLQPESIRFMA-REILILRKLNHPNIMKLE 168

  Fly   117 EVVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLKVS 181
            .:|..::..||:||.::.|.|||.:..|....|||.::||...|:|..|::.|.|.:||||:|.|
plant   169 GIVTSRASSSIYLVFEYMEHDLAGLSSNPDIRFTEPQIKCYMKQLLWGLEHCHMRGVIHRDIKAS 233

  Fly   182 NLLMTDKGCIKVADFGLARMFSNPPK-PMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILGE 245
            |:|:.:||.:|:.|||||.:.:...| .:|.::|||||||||||:|..::..:||:|:.||:..|
plant   234 NILVNNKGVLKLGDFGLANVVTPSNKNQLTSRVVTLWYRAPELLMGSTSYGVSVDLWSVGCVFAE 298

  Fly   246 LLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYN-NLTPKFHMIGQS 309
            :|:|||:|.|.:||.||..|..|.|:|.:|.|.. ..||...:|. .|..|. .|..:...:..:
plant   299 ILMGKPILKGRTEIEQLHKIYKLCGSPQDSFWKR-TKLPHATSFK-PQHTYEATLRERCKDLSAT 361

  Fly   310 GRNLLNILFIYNPKTRATAEECLKSKYFVDPPQACDPGMMPTFPQHR 356
            |..||..|....|..|.||...|.|:||:..|.||||..:|.:|.::
plant   362 GVYLLETLLSMEPDKRGTASSALNSEYFLTRPYACDPSSLPKYPPNK 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 122/302 (40%)
cdc2cAtNP_198758.2 STKc_CDK9_like 105..389 CDD:270832 114/286 (40%)

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