DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk9

DIOPT Version :10

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_068071880.1 Gene:cdk9 / 321602 ZFINID:ZDB-GENE-030131-321 Length:395 Species:Danio rerio


Alignment Length:407 Identity:137/407 - (33%)
Similarity:205/407 - (50%) Gaps:67/407 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PDPQAPITRKGFLMSLNTGTPMPIPEQNLFGRCRPVSEFEKLNRVGEGSYGIVYRARDTRSNEIV 79
            ||.:..|..|.:     .|...|.        |...|::|||.::|:|::|.|::|:..::.:.|
Zfish    15 PDRETAIMSKYY-----DGVEFPF--------CDEFSKYEKLAKIGQGTFGEVFKAKHRQTGKKV 66

  Fly    80 ALKKVRMDQEKDGLPISGLREIMILKQCHHENIVRLREVVVGKS--------LDSIFLVMDFCEQ 136
            |||||.|:.||:|.||:.||||.||:...|||:|.|.|:...|.        ..||:||.||||.
Zfish    67 ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKGEATQFNRYKGSIYLVFDFCEH 131

  Fly   137 DLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLKVSNLLMTDKGCIKVADFGLARM 201
            |||.:|.|.:..||.:|:|.:...:|..|.|:|...::|||:|.:|:|:|..|.:|:|||||||.
Zfish   132 DLAGLLSNANVKFTLAEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 196

  Fly   202 FS----NPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILGELLLGKPLLPGNSEIAQL 262
            ||    :.....|.::||||||.||||||.|.:...:|:|..|||:.|:....|::.||:|..||
Zfish   197 FSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 261

  Fly   263 DMIIDLLGAPSESIWPGF---------ADLPAVQNFTLS-------QQPYNNLTPKFHMIGQSGR 311
            .:|..|.|:.:..:|||.         .:||..|...:.       :.||             ..
Zfish   262 TLISQLCGSITPEVWPGVDKKYELYQKMELPKGQKRKVKDRLKAYVKDPY-------------AL 313

  Fly   312 NLLNILFIYNPKTRATAEECLKSKYFVDPPQACD-PGMMPTF----------PQHRNNAAPAPAV 365
            :|::.|.:.:|..|..:::.|...:|...|...| ..|:.|.          |:.|.:....||.
Zfish   314 DLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKNMLSTHNTSMFEYLAPPRRRGHMPQQPAN 378

  Fly   366 Q--PPADIPISDLLNVF 380
            |  .||....|:...||
Zfish   379 QNRNPATTSQSEFDRVF 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 121/346 (35%)
cdk9XP_068071880.1 STKc_CDK9 27..339 CDD:270848 118/332 (36%)

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