DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and jnk-1

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001021270.1 Gene:jnk-1 / 177460 WormBaseID:WBGene00002178 Length:463 Species:Caenorhabditis elegans


Alignment Length:366 Identity:107/366 - (29%)
Similarity:174/366 - (47%) Gaps:59/366 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LNTGT---------PMPIPEQNLF----GRCRPV--SEFEKLNRVGEGSYGIVYRARDTRSNEIV 79
            :|:||         .:.:|| |.:    |..:.|  ..::.|..:|.|:.|||..|.||..||.|
 Worm    82 INSGTGGGILMEPSSIHVPE-NYYSVTIGEAQMVVLKRYQNLRLIGSGAQGIVCSAFDTVRNEQV 145

  Fly    80 ALKKVRMDQEKDGLPISGLREIMILKQCHHENIVRLREVVV-GKSLD---SIFLVMDFCEQDLAS 140
            |:||:....:.........||:.::...:|:||:.:..... .|.||   .:::||:..:.:|..
 Worm   146 AIKKLSRPFQNVTHAKRAYRELKLMSLVNHKNIIGILNCFTPQKKLDEFNDLYIVMELMDANLCQ 210

  Fly   141 VLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLKVSNLLMTDKGCIKVADFGLAR----M 201
            |:   ........:..:..|:|..:::|||..:||||||.||:::.....:|:.||||||    .
 Worm   211 VI---QMDLDHERLSYLLYQMLCGIRHLHSAGIIHRDLKPSNIVVRSDCTLKILDFGLARTAIEA 272

  Fly   202 FSNPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILGELLLGKPLLPGNSEIAQLDMII 266
            |.     |||.:||.:|||||::|| ..:...||:|:.|||.|||:.|:.|.||...|.|...||
 Worm   273 FM-----MTPYVVTRYYRAPEVILG-MGYKENVDVWSIGCIFGELIRGRVLFPGGDHIDQWTRII 331

  Fly   267 DLLGAPSESIWPGFADLPAVQNFTLSQQPY----------NNLTP----KFHMIGQSGRNLLNIL 317
            :.||.|..|......  |.|:|:..::..|          :|:.|    ...:.|...|:||:.:
 Worm   332 EQLGTPDRSFLERLQ--PTVRNYVENRPRYQATPFEVLFSDNMFPMTADSSRLTGAQARDLLSRM 394

  Fly   318 FIYNPKTRATAEECLKSKY----------FVDPPQACDPGM 348
            .:.:|:.|.:.::.|:..|          :..||...|..|
 Worm   395 LVIDPERRISVDDALRHPYVNVWFDEIEVYAPPPLPYDHNM 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 101/338 (30%)
S_TKc 53..337 CDD:214567 95/315 (30%)
jnk-1NP_001021270.1 STKc_JNK 118..452 CDD:270840 99/329 (30%)
S_TKc 119..414 CDD:214567 94/305 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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