DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk-5

DIOPT Version :10

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_499783.1 Gene:cdk-5 / 176774 WormBaseID:WBGene00000407 Length:292 Species:Caenorhabditis elegans


Alignment Length:298 Identity:118/298 - (39%)
Similarity:176/298 - (59%) Gaps:24/298 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 FEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIMILKQCHHENIVRLRE 117
            ::|:.::|||:||.|::||:..|.||||||:||:|.:.:|:|.|.||||.||::..|.|:|||.:
 Worm     4 YDKMEKIGEGTYGTVFKARNKNSGEIVALKRVRLDDDDEGVPSSALREICILRELKHRNVVRLYD 68

  Fly   118 VVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLKVSN 182
            ||  .|.:.:.||.::|:|||....|:::........:.:.||:|:.|.:.|:..::|||||..|
 Worm    69 VV--HSENKLTLVFEYCDQDLKKFFDSLNGYMDAQTARSLMLQLLRGLSFCHAHHVLHRDLKPQN 131

  Fly   183 LLMTDKGCIKVADFGLARMFSNPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILGELL 247
            ||:...|.:|:|||||||.|..|.:..:.::||||||.|::|.|.:.:.|::|||:.|||..|:.
 Worm   132 LLINTNGTLKLADFGLARAFGVPVRCFSAEVVTLWYRPPDVLFGAKLYNTSIDMWSAGCIFAEIS 196

  Fly   248 -LGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYNNLTPKFH------- 304
             .|:||.||.....||..|...||:|||..||....||       ..:||    |.:|       
 Worm   197 NAGRPLFPGADVDDQLKRIFKQLGSPSEDNWPSITQLP-------DYKPY----PIYHPTLTWSQ 250

  Fly   305 ---MIGQSGRNLLNILFIYNPKTRATAEECLKSKYFVD 339
               .:...||:||..|.:.||..|..|:..|:..||.|
 Worm   251 IVPNLNSRGRDLLQKLLVCNPAGRIDADAALRHAYFAD 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 118/298 (40%)
cdk-5NP_499783.1 STKc_CDK5 3..286 CDD:143344 115/294 (39%)

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