DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk12

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_012826946.1 Gene:cdk12 / 100038049 XenbaseID:XB-GENE-493308 Length:1466 Species:Xenopus tropicalis


Alignment Length:425 Identity:143/425 - (33%)
Similarity:225/425 - (52%) Gaps:62/425 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DTNPAPD---------PQAPITRKGFLMSLNTGTPMPIPEQNLFGRCRPVSEFEKLNRVGEGSYG 65
            |.:| ||         ||.|:.::..:.....|.... .|.:...||  |.:|:.:..:|||:||
 Frog   662 DPSP-PDSPERKVVAPPQPPLKKRPKICCPRYGERKQ-TETDWGKRC--VDKFDIIGIIGEGTYG 722

  Fly    66 IVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIMILKQCHHENIVRLREVVVGK--SLD--- 125
            .||:|:|..:.|:|||||||:|.||:|.||:.:|||.||:|..|:::|.::|:|..|  :||   
 Frog   723 QVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLIHKSVVNMKEIVTDKQDALDFKK 787

  Fly   126 ---SIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLKVSNLLMTD 187
               :.:||.::.:.||..:|::....|:|..:|....|:::.|:|.|.:..:|||:|.||:|:.:
 Frog   788 DKGAFYLVFEYMDHDLMGLLESGLVQFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNN 852

  Fly   188 KGCIKVADFGLARMFSN-PPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILGELLLGKP 251
            .|.||:|||||||::|: ..:|.|.:::|||||.||||||...:|.|:|:|:.|||||||...||
 Frog   853 SGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKP 917

  Fly   252 LLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYNNLTPKFHMIGQSGRNLLNI 316
            :...|.|:|||::|..|.|:|..::||....||........:|....|..:|..:.....:||:.
 Frog   918 IFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFVPTPALDLLDH 982

  Fly   317 LFIYNPKTRATAEECLKSKYFVDPP------------QAC------------DPGMM----PTFP 353
            :...:|..|.|||:.|:|.:..|..            |.|            ..|::    |...
 Frog   983 MLTLDPSKRCTAEQTLQSDFLKDVDVCKMATPDLPHWQDCHELWSKKRRRQRQSGIVLEEPPAIK 1047

  Fly   354 QHR------------NNAAPAPAVQPPADIPISDL 376
            ..|            .|::|||......:..:|||
 Frog  1048 APRKESVSVPGGDAMKNSSPAPTQPVKTESSVSDL 1082

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 126/344 (37%)
S_TKc 53..337 CDD:214567 118/292 (40%)
cdk12XP_012826946.1 STKc_CDK12 702..1003 CDD:270847 121/302 (40%)
S_TKc 710..1003 CDD:214567 118/292 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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