DRSC/TRiP Functional Genomics Resources

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Protein Alignment magu and Smoc1

DIOPT Version :10

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_006240346.1 Gene:Smoc1 / 314280 RGDID:1303126 Length:463 Species:Rattus norvegicus


Alignment Length:614 Identity:134/614 - (21%)
Similarity:209/614 - (34%) Gaps:236/614 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PACAAKQGECDDNEGPVCGTDGQTYPTRCHLLRAQCGGHQVSLKYSGSC-----NAC----LEAV 84
            |.|...|.:      |:|.:||::|.:.|...||:|....:::.:.|.|     :.|    .:|:
  Rat    44 PHCPRTQPK------PICASDGRSYESMCEYQRAKCRDPALAVVHRGRCKDAGQSKCRLERAQAL 102

  Fly    85 KFARRQQERDPGYFVPRCRKDGNFAAMQCYGNNG-CWCSDSQGRPIADDNKQFRRKGKLRCRANR 148
            :.|::.||   ..|||.|.:||:|..:||:...| |||....|:||:..:.|             
  Rat   103 EQAKKPQE---AVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQ------------- 151

  Fly   149 RDRRRLASHQIGYNPDTSASKGSS--EAGSTAHRTCSKSDRSQFNTNLMRMFRNEAQSFF----- 206
             ::..:.|   |...|...|:|:|  :.......|.:..|.|:....:      |.|..|     
  Rat   152 -NKTPVCS---GPVTDKPLSQGNSGRKVSFRFFLTLNSDDGSKPTPTM------ETQPVFDGDEI 206

  Fly   207 RQPSLSDSHILEWQFSKLDTNGNKLLDRQEIRELKKVLRRNVKPRRCGRTFGKYCDVTKDANLNW 271
            ..|:|...|:                                              |.||:.|| 
  Rat   207 TAPTLWIKHL----------------------------------------------VIKDSKLN- 224

  Fly   272 LEWSVCFTKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTGVNPHSYSED 336
                                                  ||||....:.|                
  Rat   225 --------------------------------------NTNVRNSEKVH---------------- 235

  Fly   337 ASGSEEHEDNYEDSATGYGGEEDDSQGADLPSSRTHIPSLYMLNSKPETASQDLENDSNCWMDQS 401
                                                                      :|..::.
  Rat   236 ----------------------------------------------------------SCDQERQ 242

  Fly   402 VTLEEQGHGGKSVLFVPQCLPDGRYQRIQCYSSTSTSYCWCVNEDTGKSIPGTSVKNKRPQCD-- 464
            ..|||.....:..:.:|:|.|.|.|:.:||:.  ||.|||||..|||:.:||||.:...|.|:  
  Rat   243 SALEEARQNPREGIVIPECAPGGLYKPVQCHQ--STGYCWCVLVDTGRPLPGTSTRYVMPSCESD 305

  Fly   465 ---ESVAV------RPMKGCTEPRKTQFLKELKAYLNTSLL----PSSTTG----SNSSMWKTDD 512
               :||.|      |.:.||.|.:|.:|:..|...|.|.::    .::.||    |......|.:
  Rat   306 ARAKSVEVDDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLE 370

  Fly   513 ERIATLSFVYLDKNKNKSWDRREWKNFRDLVTSASHLRRCGKKMPRYCDVNGDKKISLAEWLNCL 577
            ||:|...|..||.|.:...::||.|.|:..|...:..::|.::...|||:|.||.|||.|...||
  Rat   371 ERVAHWYFSQLDSNSSDDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKAISLPELKGCL 435

  Fly   578 QATPRESATTAKPAQSNETASPKFQGVNP 606
            ..:....:..:.|       ..|..|.||
  Rat   436 GVSKEGGSLGSFP-------QGKRAGTNP 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 10/38 (26%)
TY 88..139 CDD:238114 19/51 (37%)
EFh_SPARC_SMOC 182..280 CDD:320013 13/102 (13%)
EF-hand motif 213..245 CDD:320013 1/31 (3%)
EF-hand motif 250..280 CDD:320013 5/29 (17%)
TY 396..463 CDD:238114 26/66 (39%)
EFh_SPARC_SMOC 475..577 CDD:320013 34/109 (31%)
EF-hand motif 512..544 CDD:320013 11/31 (35%)
EF-hand motif 549..577 CDD:320013 11/27 (41%)
Smoc1XP_006240346.1 KAZAL 42..86 CDD:197624 13/47 (28%)
Thyroglobulin_1 94..157 CDD:459665 22/79 (28%)
Thyroglob_assoc 158..229 CDD:435450 23/164 (14%)
Thyroglobulin_1 237..302 CDD:459665 26/66 (39%)
EFh_SPARC_SMOC1 325..439 CDD:320019 36/113 (32%)
EF-hand motif 370..402 CDD:320019 11/31 (35%)
EF-hand motif 407..439 CDD:320019 13/31 (42%)

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