DRSC/TRiP Functional Genomics Resources

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Protein Alignment magu and Sparcl1

DIOPT Version :10

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_037078.2 Gene:Sparcl1 / 25434 RGDID:2531 Length:634 Species:Rattus norvegicus


Alignment Length:269 Identity:65/269 - (24%)
Similarity:92/269 - (34%) Gaps:88/269 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PACAAKQGECDDNE--------GPVCGTDGQTYPTRCHLLRAQC------GGHQVSLKYSGSCNA 79
            |.|.     |.|.|        ...||||.|||.:.|||...:|      .|||:.|.|.|:|.:
  Rat   422 PHCV-----CQDPETCPPAKILDQACGTDNQTYASSCHLFATKCMLEGTKKGHQLQLDYFGACKS 481

  Fly    80 CLEAVKFARRQQERDPGYFVPRCRKDGNFAAMQCYGNN---GCWCSDSQGRPIADDNKQFRRKGK 141
            ......|...|       |..|.|.......||.|..|   |.:.::.|           |.|.|
  Rat   482 IPACTDFEVAQ-------FPLRMRDWLKNILMQLYEPNPKHGGYLNEKQ-----------RSKVK 528

  Fly   142 LRCRANRRDRRRLA-SHQIGYNPDTSASKGSSEAGSTAHRTCSKSDRSQFNTNLMRMFRNEAQSF 205
               :....::|.|| .|.|..                                |:|.|:.....:
  Rat   529 ---KIYLDEKRLLAGDHPIEL--------------------------------LLRDFKKNYHMY 558

  Fly   206 FRQPSLSDSHILEWQFSKLDTN-GNKLLDRQEIRELKKVLRRNVKPRRCGRTFGKYCDVTKDANL 269
            .        :.:.|||::||.: .:::|...|:..|:..|   |....|...|.:.||..||.::
  Rat   559 V--------YPVHWQFNELDQHPADRILTHSELAPLRASL---VPMEHCITRFFEECDPNKDKHI 612

  Fly   270 NWLEWSVCF 278
            ...||..||
  Rat   613 TLKEWGHCF 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 20/52 (38%)
TY 88..139 CDD:238114 11/53 (21%)
EFh_SPARC_SMOC 182..280 CDD:320013 23/98 (23%)
EF-hand motif 213..245 CDD:320013 8/32 (25%)
EF-hand motif 250..280 CDD:320013 10/29 (34%)
TY 396..463 CDD:238114
EFh_SPARC_SMOC 475..577 CDD:320013
EF-hand motif 512..544 CDD:320013
EF-hand motif 549..577 CDD:320013
Sparcl1NP_037078.2 MSCRAMM_ClfA <46..291 CDD:468110
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..335
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..398
KAZAL_FS 403..482 CDD:412159 23/64 (36%)
EFh_SPARC_SPARCL1 485..625 CDD:320015 42/201 (21%)
EF-hand motif 558..591 CDD:320015 9/43 (21%)
EF-hand motif 593..625 CDD:320015 10/29 (34%)
Blue background indicates that the domain is not in the aligned region.

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