DRSC/TRiP Functional Genomics Resources

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Protein Alignment TER94 and vcp

DIOPT Version :9

Sequence 1:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_958889.1 Gene:vcp / 327197 ZFINID:ZDB-GENE-030131-5408 Length:806 Species:Danio rerio


Alignment Length:800 Identity:663/800 - (82%)
Similarity:738/800 - (92%) Gaps:6/800 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KREDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVL 94
            |.:||:|||||:|:|||||||:|:.|:|||||||||||||||||||||||:||||:|:|||||||
Zfish     8 KNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRRETVCIVL 72

  Fly    95 SDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLFEIYLKP 159
            |||||.|||:||||||||||.|.|.||:|:|.|||||||||:.:||||::.||:||||||:||||
Zfish    73 SDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137

  Fly   160 YFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVG 224
            |||||||||..||.|:||..||.:|||||.|||.|||||||:|||.|:|:|||||:||||||.||
Zfish   138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVG 202

  Fly   225 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFF 289
            ||||||.||||||||||||||||||:||||||||||||||:||||||||||||||||||||||||
Zfish   203 YDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFF 267

  Fly   290 LINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLM 354
            |||||||||||||||||||||||||||||:||||||||:|||||||:||||||||||||||||||
Zfish   268 LINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLM 332

  Fly   355 DGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLE 419
            ||:|:.:|:|||||||||||||||||||||||||:||||||||||||:|:||||||||.||||||
Zfish   333 DGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLE 397

  Fly   420 QIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPS 484
            |:|.|:|||||||||:||||||||.||:|||||||||:.|||||:.||||||::||:|:::|:||
Zfish   398 QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 462

  Fly   485 ALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLL 549
            |||||||||||.||.|||||:.||:|||||||||||||||||||||.||:|||||||||||||||
Zfish   463 ALRETVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527

  Fly   550 AKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGD 614
            ||||||||||||||:||||||||||||||||||:||||||.||||||||||||||||||||||||
Zfish   528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGD 592

  Fly   615 AGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAIL 679
            .||||||||||||||||||.:||||||||||||||||||||||||||||||||||||:|||.|||
Zfish   593 GGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAIL 657

  Fly   680 KANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMD 744
            ||||||||::|:|||.::||:|.||||||||||||||||||||::||.|||||:||..|. |||:
Zfish   658 KANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNP-SAME 721

  Fly   745 MDEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFP----GQTGNTS 805
            ::||||||||...||||||:|||||||||||||||||||||||||||| :||||    |.:|.:.
Zfish   722 VEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSSNQGGSGPSQ 785

  Fly   806 GSGNNLPVNSPGDNGDDDLY 825
            ||......|...::.|||||
Zfish   786 GSSGGGGGNVFNEDNDDDLY 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TER94NP_001097249.1 CDC48 47..787 CDD:273521 630/739 (85%)
CDC48_N 47..129 CDD:280513 66/81 (81%)
CDC48_2 153..213 CDD:215011 44/59 (75%)
AAA 263..392 CDD:278434 118/128 (92%)
AAA 536..669 CDD:278434 126/132 (95%)
Vps4_C <741..783 CDD:286426 34/41 (83%)
vcpNP_958889.1 CDC48 25..764 CDD:273521 630/739 (85%)
CDC48_N 25..107 CDD:280513 66/81 (81%)
CDC48_2 131..191 CDD:215011 44/59 (75%)
AAA 241..370 CDD:278434 118/128 (92%)
P-loop_NTPase 452..>534 CDD:304359 69/81 (85%)
AAA 514..647 CDD:278434 126/132 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 708..727 11/19 (58%)
Vps4_C <718..760 CDD:286426 34/41 (83%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 768..806 15/38 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596068
Domainoid 1 1.000 264 1.000 Domainoid score I1875
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5168
Inparanoid 1 1.050 1332 1.000 Inparanoid score I140
OMA 1 1.010 - - QHG60945
OrthoDB 1 1.010 - - D169540at33208
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 1 1.000 - - otm25087
orthoMCL 1 0.900 - - OOG6_100525
Panther 1 1.100 - - LDO PTHR23077
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R182
SonicParanoid 1 1.000 - - X1760
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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