DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1513 and CG3860

DIOPT Version :10

Sequence 1:NP_610534.3 Gene:CG1513 / 36028 FlyBaseID:FBgn0033463 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001286802.1 Gene:CG3860 / 37825 FlyBaseID:FBgn0034951 Length:457 Species:Drosophila melanogaster


Alignment Length:476 Identity:107/476 - (22%)
Similarity:179/476 - (37%) Gaps:126/476 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 DYDALYEEEEETDLSMEAHGSMITHLLSQVKIGMDLTKVVLPTFILERRSLLEMYADYFAHPDLF 461
            || |.:.|..|...:|.:...:....:.:..||.||:|:.:|..:.|..|.|:...:|..:..|.
  Fly     5 DY-AEHVERTELPATMISRKEVSIWAILKNCIGKDLSKITMPVMLNEPLSFLQRLCEYMEYAQLL 68

  Fly   462 IKISDLDDPRDRIVQVCRWYMSAYHAGRKSAVAKKPYNPILGEVFQCHWDIPGISQDAQEVRDGP 526
            .:.:..:.|.||:..|..:.:||..:..:.  ..||:||:|||.::                   
  Fly    69 TEAAQQEHPADRMKYVAAFAVSALASNWER--LGKPFNPLLGETYE------------------- 112

  Fly   527 VPWCRRDQLTFLAEQVSHHPPISAFYAEHYNKKITFAAHVWTKSKFLGLSIGVHNIGEGVVTLVD 591
               .::.....:.||||||||:|||:||  :|...|...:..|.||.|.|:.|:..|...|....
  Fly   113 ---LQKGDYRIVCEQVSHHPPVSAFHAE--SKDFKFHGTISPKIKFWGKSVEVNPKGTVTVEFPK 172

  Fly   592 RSEEYIVTFPNGYGRSILTVP-WIELGGSVEIKCPQSGYYANVEFLTKPFYGGKRN--RVSAEVY 653
            .:|.|..|..|....:|:... |||..|.:||....:|:.|::.|  |....|.:|  ||...|.
  Fly   173 WNESYSWTNVNCCVHNIIVGRLWIEQYGKMEITNHATGHVASLTF--KSAGSGAKNLHRVEGFVK 235

  Fly   654 APSEKKPFVSITGEWS-----------------GLMEAKWHD--KNKT--EVFVDVN--RIPIFK 695
            ..||...:. :.|:|:                 |..:...:|  .|.|  ::|..:|  ::..|:
  Fly   236 DASETNLYF-LYGKWTEFIKCCSAESYVQFLKQGTRKNDDYDGSPNGTPKKMFSKLNSFKLNSFR 299

  Fly   696 KQVRPIVEQDEY---------------------ESRRVWK-------------------EVTA-- 718
            ......|..|.|                     :|..:|.                   ::.|  
  Fly   300 SLSIQDVSSDSYPPMEQEGDIPKSDSAYSLDIPDSTTLWSCKPRPSNCSEYYQFTHFALQLNAMD 364

  Fly   719 ---------------------GLKFNDIERATTAKFVVEQQQRDQAKVRKEYDL-AWEHKHFKPV 761
                                 .|:..:::.|:..|..:|::||...|.||..:. .|..:.||..
  Fly   365 SNMKPPLTLCPTDSRLRPDILHLEEGNLDGASKEKTRLEEKQRHTRKQRKSTNSDDWSPRWFKYA 429

  Fly   762 G------DNWIYAKPLSQRMY 776
            .      |:|:|:.....|.|
  Fly   430 TNPHTKIDDWLYSGGYWDRKY 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1513NP_610534.3 PH_ORP9 24..125 CDD:241444
Oxysterol_BP 421..767 CDD:460126 98/441 (22%)
CG3860NP_001286802.1 Oxysterol_BP 26..450 CDD:460126 100/452 (22%)
Blue background indicates that the domain is not in the aligned region.

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