Protein Alignment Lsm11 and lsm11

DIOPT Version :10

• Sequence 1: NP_610522.1
• Gene: Lsm11 / 36013
• FlyBaseID: FBgn0033450
• Length: 256
• Species: Drosophila melanogaster
• Sequence 2: XP_017214640.3
• Gene: lsm11 / 100004030
• ZFINID: ZDB-GENE-050309-124
• Length: 328
• Species: Danio rerio
• Alignment Length: 317
• Identity: 80/317 - (25%)
• Similarity: 128/317 - (40%)
• Gaps: 84/317 - (26%)

  Fly     2 ESRDRKTSNEDDSSEISELDVGSDRFNPLRALYEPNFRVTDAVPKV-IYQNLAAFESALKKFGIW 65
            ||..:....::|..| ::||:.||:|:||.|||.|  :|....|.: .:.|:|.:||.:|..
Zfish    27 ESTGQNPETDEDDVE-TKLDIRSDKFDPLLALYSP--QVPLPYPNIKCFNNIAEYESFMKGG--- 85

  Fly    66 QLNKRQKPGSAEGGDQGTSKKASTSEAVDIL-------PPERRFEPHQMPTTSSRKKHHRNIFTY 123
              ..|.||.:.|...:...|..:..|.::.|       |.....|...:.....::|..:|:.|.
Zfish    86 --RGRAKPENVEKRLRKAQKGKADPERIERLKRLMVNNPVPEEGEGSGVKRPPRQRKTAKNVLTR 148

  Fly   124 MEAAVG-PLELLTKCISPASHNESNERRRVRVVIRKHGSVGGSVEGELLAFDKQWNLLLRNVTET 187
            |....| ||..|.:|:        .|:.||:|.||....:.|...|.::||||.|||.:.:|.||
Zfish   149 MPLHTGSPLGQLNRCV--------QEKIRVKVHIRTFKGLRGVCSGFVVAFDKFWNLAMVDVDET 205

  Fly   188 WK----------------------------------RRKYNYGEQNICDTPVDCTGRLKELG--- 215
            ::                                  .||  .|::.:...|...:.:||:..
Zfish   206 YREPLLGQALYHEKALTITRLFEKLKVQETAALSAVERK--QGDKLLKSDPRSGSSQLKDQSRRS 268

  Fly   216 ----------------ITLPRTVVKNLNRKNVEI----RRELPQILIRGENVVLVSL 252
                            .|..|.:.|..:|..||.    .|.:.|:.||||||:||::
Zfish   269 DSRHNKEKPELSEIDKSTSSREMQKPESRPKVEYGRVHTRHVNQLFIRGENVLLVNI 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lsm11	NP_610522.1	LSm11_M	<158..204	CDD:212485	15/79 (19%)
lsm11	XP_017214640.3	LSm11_M	160..225	CDD:212485	20/72 (28%)