DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and ASHR2

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_849991.1 Gene:ASHR2 / 816483 AraportID:AT2G19640 Length:398 Species:Arabidopsis thaliana


Alignment Length:467 Identity:94/467 - (20%)
Similarity:145/467 - (31%) Gaps:185/467 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 GPRGRYMVAKEAISKGNVIFSERA----SCFVPLEQLL--ICQQCAATL-MSAPIPCPNCHQRVV 280
            |.|||.:||.:::..|.||..|..    |.|..|...:  .|..|...| .||...|.:| ..|.
plant    19 GGRGRSLVAAQSLRAGQVILRESPLLLYSAFPFLSSSVSPYCDHCFRLLASSAHQKCQSC-SLVS 82

  Fly   281 YCSRKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQEMTSAKGMWEEIMN 345
            :||..|..:|:                                    |.|.|            :
plant    83 FCSPNCFASHT------------------------------------PWLCE------------S 99

  Fly   346 LSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFHSLPASIED 410
            |.|..:.|.:|..           ||..|.::....|.:               .::...||..|
plant   100 LRRLHQSSSSAFS-----------DQPSDRQVQARFLLS---------------AYNLAAASPSD 138

  Fly   411 WQLIISALILRFAGQLLANG----HVGD--------ALLGVGMEPKEFVMLQPELWQKPRHLKRG 463
            :|:::|   |:.:|.  :||    ..||        :||. .:.|...|.:.|:|  ....|.:.
plant   139 FQILLS---LQGSGS--SNGDPSCSAGDSAAAGFLHSLLS-SVCPSLPVSISPDL--TAALLSKD 195

  Fly   464 QLHNLSHSDPITAIN----------LPYLSLCNHACEPSIRTKFD--------GCSVVNYAAKDI 510
            :::.....:|.:..|          .|..|..||.|.|: ..:||        ...::.....|:
plant   196 KVNAFGLMEPCSVSNEKRSVRAYGIYPKTSFFNHDCLPN-ACRFDYVDSASDGNTDIIIRMIHDV 259

  Fly   511 LEGEEIFNCY---TMDYRNSLKLQRSHPLKAIYKFECTCAKC------TRTDPDQNYLS------ 560
            .||.|:...|   .|:|.:     |...|...|.|:|.|.:|      :..:.|:|.:.      
plant   260 PEGREVCLSYFPVNMNYSS-----RQKRLLEDYGFKCDCDRCKVEFSWSEGEEDENEIMEEMEDQ 319

  Fly   561 ---------------------------------FHRYRCEKPNCRQEFLP-DAKVQQNNLRWWLR 591
                                             |.||.|||.||.....| ..|..         
plant   320 DEQEEMEDSVGENEEEVCGNGVDDESNFPHAYFFVRYMCEKENCFGTLAPLPPKTH--------- 375

  Fly   592 CNAEKPITCTVC 603
             :|.:.:.|.||
plant   376 -DASRVLECNVC 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 12/32 (38%)
zf-MYND 258..298 CDD:460312 12/40 (30%)
SET <359..549 CDD:394802 45/222 (20%)
ASHR2NP_849991.1 SET_SMYD <198..296 CDD:380997 23/103 (22%)

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