DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Smyd4-1 and Zmynd15

Sequence 1:NP_610500.2 Gene:Smyd4-1 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001025100.1 Gene:Zmynd15 MGIID:3603821 Length:736 Species:Mus musculus

Alignment Length:112 Identity:25/113 (22%)
Similarity:39/113 (35%) Gaps:42/113 (37%)


  Fly   271 PCPNCHQRVVYCSRKCREA------HSAIHKFEC---AAYRKDILRLLGISHLALRLLLTYIPYI 326
            |||.| ..|:||...|.:|      ....|:|.|   :|:.:.:..|..            :|: 
Mouse   321 PCPQC-SAVLYCGEACLQADWRRCPDDVSHRFWCPRLSAFMERVGELAS------------LPF- 371

  Fly   327 RPHLQEMTS--------------AKGMWEEIMNLSRKPEESENAPEY 359
             .:..|:||              .:|.|.::..|...|    .||.|
Mouse   372 -TYTAEVTSETFNKEAFLASRGLTRGYWTQLSMLIPGP----GAPRY 413

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 zf-MYND 258..298 CDD:280009 11/33 (33%)
SET <447..526 CDD:214614
Zmynd15NP_001025100.1 zf-MYND 307..353 CDD:280009 11/33 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C56465283
eggNOG 1 0.900 E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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