DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and smyd1b

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001034725.1 Gene:smyd1b / 569027 ZFINID:ZDB-GENE-060522-1 Length:486 Species:Danio rerio


Alignment Length:476 Identity:95/476 - (19%)
Similarity:153/476 - (32%) Gaps:192/476 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 EILTDPGPRGRYMVAKEAISKGNVIFSERA---------------SCFVPLEQLLICQQCAATLM 266
            |:...|| :||.:.|.:....|:|:|:|..               |||...|:|..|.||     
Zfish     5 EVFDSPG-KGRGLRATKEAWAGDVLFAEPPFASVVFDSQASSICHSCFRRQEKLQRCGQC----- 63

  Fly   267 SAPIPCPNCHQRVVYCSRKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQ 331
                      :...||.:.|:.|....||.||||.:                     .|.:|..:
Zfish    64 ----------RFAQYCDKTCQRAGWEEHKLECAAIK---------------------TYGKPPSE 97

  Fly   332 EM-TSAKGMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHI--LCANLLQLYLKE 393
            .: .:|:.:|       |..::..          :||.......|:|..||  :..:.|:.:..:
Zfish    98 NVRLAARILW-------RMDKQGS----------VVSDNQLTTLEDLEDHICDISEDDLKDFKVD 145

  Fly   394 HTDFYDQF--HSLPASIEDWQLIISALILRFAGQLLANGHV-----GDALLGVGMEPKEFVMLQP 451
            ..:|.|.:  :|.|.:::.        :....|.:..||.:     |...:|||:          
Zfish   146 IHNFLDYWPRNSKPHTVDS--------VSHILGVINCNGFMVSDQRGLQAVGVGL---------- 192

  Fly   452 ELWQKPRHLKRGQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKFDGCSVV----NYAAKD--- 509
                                       .|.|.|.||.|.|:       |:|:    |.:|.|   
Zfish   193 ---------------------------FPNLCLVNHDCWPN-------CTVILNNGNQSAIDTVF 223

  Fly   510 -------------ILEGEEIFNCYTMDYRNSLKLQRSHPLKAIYKFECTCAKCTRTDPD------ 555
                         |..|||:...| :||.| :...|...||..|.|:|||..||....|      
Zfish   224 HSQKRIELRALGKISAGEEVTVAY-VDYLN-VSADRQRLLKQQYFFDCTCKHCTEKIKDDLKMAG 286

  Fly   556 -------------QNYLSFHRYRCEKPN--------------CRQEFLPDAKVQQNNLRWWLRCN 593
                         :....|.|.:.||..              ||:.......|..:...::||  
Zfish   287 AEVDGVKVPEEQVKEVTEFSRQKLEKMEKARIEANYNEVVKICRECVEKQENVLADTHIYYLR-- 349

  Fly   594 AEKPITCTVCHELQHFAWYNE 614
                :.||:...|.:..:::|
Zfish   350 ----VCCTLSEVLSYLQFFDE 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 13/49 (27%)
zf-MYND 258..298 CDD:460312 9/39 (23%)
SET <359..549 CDD:394802 46/218 (21%)
smyd1bNP_001034725.1 SET_SMYD1 2..276 CDD:380924 80/378 (21%)
zf-MYND 47..85 CDD:460312 14/52 (27%)

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