DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and CG18213

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_650589.2 Gene:CG18213 / 42055 FlyBaseID:FBgn0038470 Length:879 Species:Drosophila melanogaster


Alignment Length:956 Identity:171/956 - (17%)
Similarity:318/956 - (33%) Gaps:322/956 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QQNELITLNENYKDEFETFKSLASMPADI------LQIFQKLALDLLQDLEQPVDRKGCAERSK- 67
            :.:|.||::|            |..|.::      |:|.:|....:..|..:..:  ||...|| 
  Fly    15 EASEYITMSE------------AMCPRNLIECELFLKILRKTTDKVFLDFSEVAE--GCLNISKK 65

  Fly    68 --NLREEGNLMF-----------KESASGSSKDSVL-------------KACR--LYSEAVFEAE 104
              |::....|..           ..|||.:..|:::             .||.  ||.|::..|.
  Fly    66 CMNMKSPTVLKMTLQSLDEIICRAPSASPTCVDAIMARSVLYIKNNQNTTACNDLLYYESLDPAL 130

  Fly   105 NAVEELSLA--------FANRGIALQEYGYYREAYDDCSNALECGYPERLRHKVIMRQAFCAWKL 161
            ...|...::        |.||     ||...::........:|.|                    
  Fly   131 KTAEGTIISQILHCICLFVNR-----EYEASKDKLSVVKGLIEDG-------------------- 170

  Fly   162 KKIASLEEHLDYLGQLQLKESFEQQLEDLKQKLELLKNQPREQETQGKVVDKSLGEILTDPGPRG 226
                :|.:..:....|.|.|..|:::...:..:|..|    :.:|:..|..|........|....
  Fly   171 ----TLADRSEVSPFLALIEQHEERINQARINVEFCK----KVQTENFVPFKGFKLTRKIPFASQ 227

  Fly   227 RYMVAKEAISKGNVIFSERASCFVPLEQLLICQQCAATLMSAPI--------------PCPNCHQ 277
            ....::::|.|...:|   |||.||..::::.:.......|||.              .|.||..
  Fly   228 ACDYSEKSIEKSGGVF---ASCDVPKGEIVLVENPVYFQFSAPFLNCELCGVHQQQLYTCDNCRY 289

  Fly   278 RVVYCSRKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQE-------MTS 335
            | .|||:.|.::.:.:|::||..|:..::.:|. :::..||......||.|.:.:       :::
  Fly   290 R-SYCSKSCMKSDAEVHQYECYGYKIGLIPMLE-ANMLFRLFCEAGEYILPAIVDYAMDGGILSN 352

  Fly   336 AKGMWEEIMNLSRKPEESEN--------APEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLK 392
            .:..|..|:..:::.|::.|        ||:|....|          |:....:..|..|.:::.
  Fly   353 PRDAWTFILEHAQEEEKTYNLVGELLATAPDYNLLTR----------EKYTEIVTTAFRLSVFIY 407

  Fly   393 EHTDFYDQFHSLPASIE-DWQLIISALILRFAGQLLAN-----------------GHVGDALLGV 439
            ..|...:::..|.|.:: |...:::|::||..|.:|.|                 ....|.....
  Fly   408 NDTRLAEKYFYLLALVKTDLITVMAAILLRLGGHVLLNSQRDNLCYRQREGIDAMNENNDEFENC 472

  Fly   440 GMEP-------------------KEFV-----------MLQPELWQK-----PRHLKRGQLHNL- 468
            |:.|                   .:||           .::||..:|     |......:||:: 
  Fly   473 GILPMPTDRISANVFSYYGVNAITDFVDCYNNVHDSLAEIEPEYPEKFSNDSPIFRFADRLHSIC 537

  Fly   469 -------SHSDPITAINLP------YLSLCN-----------------------HACEPSIRTKF 497
                   :..|.::|..||      .|.:.|                       |..|.:::.|.
  Fly   538 MQKYEIEAVEDLVSADTLPEQEINEILQIFNTSQRCQLLTNIAKYFQQFVYQYFHKIENTVQLKS 602

  Fly   498 DGC-----------------------SVVNYAAKDILEGEEIFNCYTM----DYRNSLKLQRSHP 535
            ..|                       .||...||.:.:|||:..|...    |....|.|.|   
  Fly   603 TLCVTLKAFKQNCGTKNIKAIFLPNGKVVGVTAKKVHKGEELVICPDFARYRDQSRILDLAR--- 664

  Fly   536 LKAIYKFECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPDAK----VQQNNLRWWL--RCNA 594
             :..:.|.        |..:..|.:..:    .|:  .||:...|    ..:.||..|:  |.:.
  Fly   665 -RGDFNFS--------TSIENEYENLEK----MPS--PEFVRHNKAFIAAIKKNLSAWIESRLDV 714

  Fly   595 EKPITCTVCHELQHFAWYNEFLGLIGSSADSSKRQAL--FKAFDDLDKWLVDHHSLKRIMAEELV 657
            ...:..|:.     :..||.||.|.....|.::...:  |..|..|:.:|  .||...|:.    
  Fly   715 NLQLNLTIL-----YGTYNSFLALHCEEKDETRFLGVLKFSMFLALNGFL--QHSTDNIVH---- 768

  Fly   658 TACFYEIDGGTSLDEFEYEDL---------ARIIRKQLEGIAAQCGDNSTEYIARMTYLWDIIAQ 713
               |.|:   |..|:..::::         .|.|.:|...|...|.:..:|| .:|..:......
  Fly   769 ---FVEL---TETDDIHFKNIEIYRQSLCVIRCIIEQYINIMVNCPEVDSEY-PKMVLVSSSFIL 826

  Fly   714 KKCRTDRKELLEMKGKVDYLASEHREVFLNY----------YNDFI 749
            |:.:...:.|::.:        |...:::.|          :|.|:
  Fly   827 KRLQIHAEALIDNE--------EASSLYMEYCTHHYKWKTVFNSFL 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 8/34 (24%)
zf-MYND 258..298 CDD:460312 12/53 (23%)
SET <359..549 CDD:394802 49/306 (16%)
CG18213NP_650589.2 None

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