DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and SmydA-9

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_572539.2 Gene:SmydA-9 / 31859 FlyBaseID:FBgn0030102 Length:500 Species:Drosophila melanogaster


Alignment Length:573 Identity:110/573 - (19%)
Similarity:187/573 - (32%) Gaps:189/573 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 GRYMVAKEAISKGNVIFSERASCFVPL---------EQLLICQQCAATLMSAPIPC------PNC 275
            ||.:||..::.:|.:||.:.     ||         :.|..|..|...|......|      |.|
  Fly    34 GRGVVATRSLKRGEII
FRDS-----PLLIGLAAHEEDSLNACSVCLKMLPDTRFMCRQGCGLPVC 93

  Fly   276 HQRVVYCSRKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIRPHLQEMTSAKGMW 340
            .    .|::|.:      ||.:|     |:.:..|                              
  Fly    94 S----LCAKKKQ------HKSDC-----DLFKSWG------------------------------ 113

  Fly   341 EEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELN-YHILCANLLQLYLKEHTDFYDQFHSL 404
                     |.|.:.|...:..|..|::......|:.: .:.|.|||...:..|..:....|.:.
  Fly   114 ---------PNEPDVANSVIIRLLCVARAINLSKEQRDLIYCLQANLDNNHRTEVRNAAKCFKNF 169

  Fly   405 PASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRGQLHNLS 469
            |.   |.:||  .::.|....|..||.  |.......:.:||         ..|.|         
  Fly   170 PT---DKKLI--EIMNRTVAVLRTNGF--DKTTDRTNDNQEF---------NYRAL--------- 209

  Fly   470 HSDPITAINLPYLSLCNHACEPSIRTKFD--GCSVVNYAAKDILEGEEIFNCYTMDYRNS----- 527
                     .|...:.||.|.|:....|:  ..:::..||.||.||.|:...||..:..:     
  Fly   210 ---------YPLFGVVNHDCIPNAYYTFEEKTNNMIVRAAVDIPEGFEVTTTYTKLFTGNIARHL 265

  Fly   528 -LKLQRSHPLKAIYKFECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPD-AKVQQNNLRWWL 590
             ||:::|        |.|.|::|  :||.:.........|...||....:|: ..:...|   | 
  Fly   266 FLKMKKS--------FTCKCSRC--SDPTEKGAFISGLYCRDTNCTGLVVPEITGLPHPN---W- 316

  Fly   591 RCNAEKPITCTVCHE---------LQHFAWYNEFLGLIGSSADSSKRQALFKAFDDLDKWLVDHH 646
                    .|.||.:         .|.||     .|.|.:..:|:..:.|.:..::.....:...
  Fly   317 --------NCLVCKQKSTHAQMMKSQDFA-----SGAINAKVNSNSLRTLVQYLNEKSDSFIPSS 368

  Fly   647 S----------LKRIM------AEELV--TACFYEIDGGTSLDEFEYED------LARIIRKQLE 687
            :          |:|:.      :|||.  |...|..|....:|:....|      |..::|::.|
  Fly   369 NYVVIDAKMSVLQRLQQGREDCSEELAHNTRLRYSRDITQLMDKLGLGDSLLRTHLEELLRREEE 433

  Fly   688 GIAAQCGDNSTEY---------IARMTYLWDIIAQKKCRTDRKELLEMKGKVD 731
            ..|.:..|.:.:.         .|....|.:::  :|.::::.|..|..|..|
  Fly   434 RRAKRLADEAEKQRKLAELQAKAAEADKLLEVL--QKEQSEQSEQAEPAGTAD 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 7/25 (28%)
zf-MYND 258..298 CDD:460312 10/45 (22%)
SET <359..549 CDD:394802 43/198 (22%)
SmydA-9NP_572539.2 SET 26..>49 CDD:394802 5/14 (36%)
SET_SMYD <183..280 CDD:380997 29/133 (22%)

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