DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and SMYD1

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_938015.1 Gene:SMYD1 / 150572 HGNCID:20986 Length:490 Species:Homo sapiens


Alignment Length:176 Identity:37/176 - (21%)
Similarity:60/176 - (34%) Gaps:52/176 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 STEW--DSEDSDTV-----------------DEAND--------------ASEYEDVDYE---SK 63
            :|.|  |.|||.:|                 |.::|              |.|.||:|.|   :|
Human   225 NTTWIRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGLDTSVASPSSAGEDEDLDLERRRNK 289

  Fly    64 LSNVFSNMSLATSQSKLSMYSTE--SNEASDGTHGQDAERTLVQSD----TEEEEDPDERYDEGN 122
            ...:|..::....::.|..:.:.  .:|.......||...|::|.:    ...........|:.|
Human   290 KRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSN 354

  Fly   123 --GSGSTSDSSNTLDAGSEEEEEEEEHEKQPIFTDRGGGDADLNLD 166
              |.|::.:......||..        |.||..|.|..|...:||:
Human   355 RTGQGASFNPEGQPMAGFT--------ETQPQVTVRTPGSMGMNLN 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802
zf-MYND 258..298 CDD:460312
SET <359..549 CDD:394802
SMYD1NP_938015.1 SET_SMYD1 7..281 CDD:380924 12/55 (22%)
zf-MYND 52..90 CDD:460312
Blue background indicates that the domain is not in the aligned region.

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