DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-1 and SmydA-1

DIOPT Version :10

Sequence 1:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_309979.5 Gene:SmydA-1 / 1271226 VectorBaseID:AGAMI1_002584 Length:534 Species:Anopheles gambiae


Alignment Length:526 Identity:110/526 - (20%)
Similarity:176/526 - (33%) Gaps:161/526 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 GRYMVAKEAISKGNVIFSERASCFVPLEQLL--ICQQCAATLMSAP-IPCPNCHQRVVYCSRKCR 287
            ||::||...|..|.::..|......| .|:.  :|..|...|.... :.|..|...|  |.|.|:
Mosquito    62 GRFLVATRDIKAGEIVLKESPLVHGP-AQITGPVCVGCLQGLEEKKYLDCERCGWPV--CKRSCQ 123

  Fly   288 E--AHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPY-----IRP----HLQEMTSAKGMWE 341
            :  :|.|..||..|...|     :.|.|.       |:|:     :.|    .|.|...|:  ||
Mosquito   124 DSPSHQAECKFTIARGSK-----ISIQHF-------YVPHPTYQCLMPVRCLLLAESDPAR--WE 174

  Fly   342 EIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFHSLPA 406
            .::.|....||...:.::......|::|       :.....|.|                     
Mosquito   175 TLLKLESHEEERRGSEQWRNDREGVAKL-------IPRFFKCEN--------------------- 211

  Fly   407 SIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRGQLHNLSHS 471
               .|.   ...|||..|.:..|||             |..|.:|         ....::|::  
Mosquito   212 ---KWD---EDEILRVVGIIQVNGH-------------EVPMTEP---------SSVAIYNMA-- 246

  Fly   472 DPITAINLPYLSLCNHACEPSIRTKF-DGCSVVNYAAKDILEGEEIFNCYT-MDYRNSLKLQRSH 534
                       |:..|:|.|::...| :...||.:|...|..|:.:..||| :.:....:|:.  
Mosquito   247 -----------SMLEHSCRPNLAKSFTNRGEVVMWAPNPIRRGDRLSICYTDVLWTTGNRLEH-- 298

  Fly   535 PLKAIYKFECTCAKCTRTDPDQNYLSFHRYRC----EKPNCRQEFLPDAKVQQNNLRW---W--L 590
             |:....|.|.|.:|:.....:.|  |...||    :...|:...||     .:|.:|   |  |
Mosquito   299 -LQQTKMFRCECERCSDRTEYETY--FSAVRCSGFQKDSKCKGFLLP-----VDNAQWTGEWQCL 355

  Fly   591 RCNAEKPITCTVCHELQHFAWYNEFLGLIGSSADSSKRQALFKAFDDLDKWLVDHHSLKRIMAEE 655
            ||:.|.. ..|||..|:......|       :.:..:.....:......|||..:|   :.|.: 
Mosquito   356 RCSKEVS-GATVCQILERARMDLE-------AMEKHREDHCNRYMKHYSKWLTANH---QYMVD- 408

  Fly   656 LVTACFYEIDGG---TSLDEFEYE----------DLARIIRK--------------QLEGIAAQC 693
             |.....::.||   .::.:..||          ||..:..|              :|....|:.
Mosquito   409 -VKISLSQVIGGKNPEAIKKIPYEKLMNKIKICQDLIALFEKICPAEARAFGATRFELHAALAEL 472

  Fly   694 GDNSTE 699
            |..|||
Mosquito   473 GRRSTE 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 7/25 (28%)
zf-MYND 258..298 CDD:460312 13/42 (31%)
SET <359..549 CDD:394802 34/191 (18%)
SmydA-1XP_309979.5 None

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