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Protein Alignment Smyd4-1 and Smyd1

DIOPT Version :9

Sequence 1:	NP_610500.2	Gene:	Smyd4-1 / 35985	FlyBaseID:	FBgn0033427	Length:	751	Species:	Drosophila melanogaster
Sequence 2:	NP_001153599.1	Gene:	Smyd1 / 12180	MGIID:	104790	Length:	490	Species:	Mus musculus

Alignment Length:	500	Identity:	103/500 - (20%)
Similarity:	159/500 - (31%)	Gaps:	190/500 - (38%)

- Green bases have known domain annotations that are detailed below.

  Fly   217 EILTDPGPRGRYMVAKEAISKGNVIFSERA---------------SCFVPLEQLLICQQCAATLM 266
            |:.|..| :||.:.|.:.....:|||:|||               :||...|:|..|.||..
Mouse    10 EVFTSEG-KGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQEKLHRCGQCKF--- 70

  Fly   267 SAPIPCPNCHQRVVYCSRKCREAHSAIHKFECAAYRKDILRLLGISHLALRLLLTYIPYIR-PHL 330
                    .|    ||.|.|::.....||.||||.:|                     |.: |:.
Mouse    71 --------AH----YCDRTCQKDAWLNHKNECAAIKK---------------------YGKVPNE 102

  Fly   331 QEMTSAKGMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAI-----DEELNYHILCANLLQLY 390
            ....:|:.||       |...|.....|  ..|..|..|...:     :|:....:.....||.:
Mouse   103 NIRLAARIMW-------RVEREGTGLTE--GCLVSVDDLQNHVEHFGEEEQKELRVDVDTFLQYW 158

  Fly   391 LKEHTDFYDQFHSLPASIEDWQLIISALILRFAGQLLANGHV-----GDALLGVGMEPKEFVMLQ 450
            ..:...|..|:                 |....|.:..||..     |...:|||:
Mouse   159 PPQSQQFSMQY-----------------ISHIFGVINCNGFTLSDQRGLQAVGVGI--------- 197

  Fly   451 PELWQKPRHLKRGQLHNLSHSDPITAINLPYLSLCNHACEPSIRTKFDGCSVV----NY------ 505
                                        .|.|.|.||.|.|:       |:|:    |:
Mouse   198 ----------------------------FPNLGLVNHDCWPN-------CTVIFNNGNHEAVKSM 227

  Fly   506 ----------AAKDILEGEEIFNCYTMDYRNSLKL--QRSHPLKAIYKFECTCAKCTRTDPDQNY 558
                      |...|.||||:    |:.|.:.|.|  :|...||..|.|:|:|..|.:...|..:
Mouse   228 FHTQMRIELRALGKISEGEEL----TVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQKGLKDDLF 288

  Fly   559 LSFHRYRCEKPNCRQEFLPDA------------KVQQNNLRWWLRCNAEKPITCTVCHELQHFAW 611
            |:..    |.|...||.:.:.            |.:...|      ..|....|..|.|.|...:
Mouse   289 LAAK----EDPKPSQEVVKEMIQFSKDTLEKIDKARSEGL------YHEVVKLCRECLEKQEPVF 343

  Fly   612 YNEFLGLIGSSADSSKRQALFKAFDDLDKW---LVD------HHS 647
            .:..|.::...:.:|:..:..:|:::...:   :||      ||:
Mouse   344 ADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN 388

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.