DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG8800 and Lrriq3

Sequence 1:NP_610483.1 Gene:CG8800 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_083214.2 Gene:Lrriq3 MGIID:1921685 Length:633 Species:Mus musculus

Alignment Length:190 Identity:43/191 (23%)
Similarity:73/191 (38%) Gaps:37/191 (19%)


  Fly     1 MSKATTIKEALKRWEE---REQQNSLTAKVIDLQFQWPPIEKMDSTLGTLVQCERISMSTNMIEK 62
            ::|..|..|....:.|   .:|::.:..|...|.     ::.|:: |.|.:.......|.|.:..
Mouse     6 ITKELTSHEEWSHYNENIIEDQKDFVFVKYSGLH-----LKSMEN-LQTCISLRVCIFSNNFLTD 64

  Fly    63 IFGLSGMKCLKVLSLSRNYIKQISGLEAVAETLEELWLSYNLIEKIKGLTGLKCLKVLYISNNLI 127
            |..|...|.|..|.|..|.||.:..        :..|            :|||.||:||:.:|..
Mouse    65 IQPLQSCKKLIKLDLHGNQIKTLPD--------KNFW------------SGLKNLKLLYLHDNGF 109

  Fly   128 KDWSEFNRLAEIESLEDLVVVGNPLS--EGLDEPTWRAECIKRLPTIRKLDGEPVVLNEE 185
            ........|:...||..|.:...|:|  :|     :|...:..:..::.|| ..|:.:||
Mouse   110 SKLKNICVLSGCVSLIGLTMFDCPVSLKKG-----YRHVLVNSIWPLKALD-HHVISDEE 163

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG8800NP_610483.1 LRR_9 14..184 CDD:317038 38/175 (22%)
leucine-rich repeat 50..71 CDD:275380 5/21 (24%)
leucine-rich repeat 95..116 CDD:275380 4/21 (19%)
leucine-rich repeat 117..141 CDD:275380 6/24 (25%)
Lrriq3NP_083214.2 LRR_8 51..109 CDD:290566 20/78 (26%)
LRR_4 51..89 CDD:289563 11/38 (29%)
LRR 1 51..72 4/21 (19%)
leucine-rich repeat 52..73 CDD:275378 5/21 (24%)
LRR_4 72..115 CDD:289563 16/63 (25%)
LRR 2 73..94 7/41 (17%)
leucine-rich repeat 74..98 CDD:275378 10/44 (23%)
LRR 3 98..119 6/21 (29%)
leucine-rich repeat 99..112 CDD:275378 5/13 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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