Protein Alignment CG8800 and Lrrc43

DIOPT Version :9

• Sequence 1: NP_610483.1
• Gene: CG8800 / 35962
• FlyBaseID: FBgn0033408
• Length: 188
• Species: Drosophila melanogaster
• Sequence 2: NP_001163867.1
• Gene: Lrrc43 / 288751
• RGDID: 1561461
• Length: 681
• Species: Rattus norvegicus
• Alignment Length: 220
• Identity: 54/220 - (24%)
• Similarity: 89/220 - (40%)
• Gaps: 57/220 - (25%)

  Fly     1 MSKATTIKEALKRWEEREQQNSLTAK------------VIDLQFQWPPIEKMDSTLGTLVQCERI 53
            |.|.::.::...|  |...||.||.|            |:|     ..:..:|..:...::.|.:
  Rat    93 MLKDSSAEDRFLR--ELAIQNPLTIKDTFFYSYFRCLRVVD-----KGVSLVDKEILKFLKLEEL 150

  Fly    54 SMSTNMIEKIFGLSGMKCLKVLSLSRNYIKQISGLEAVAE----TLEELWLSYNLIEKIKGLTGL 114
            .:|.|.|:.|...:....||||.|   |...|:.:|.:..    .|:.|.|.:|.:        |
  Rat   151 VLSANKIKDIDANNLPPTLKVLEL---YGNLIASMECLCSPPPPNLQHLGLGHNKL--------L 204

  Fly   115 KCLKVLYISNNLIKDWS-------EFNRLAEIES----------LEDLVVVGNPLSEGLDEPTWR 162
            ..|:.||:::|   :|.       .||.|.:::|          |..||:.||||:.   .|.:|
  Rat   205 GPLESLYVTSN---NWPLLVSLDLGFNDLTDLQSMILGLSTLKCLRLLVLQGNPLAL---VPYYR 263

  Fly   163 AECIKRLPTIRKLDGEPVVLNEEPQ 187
            ...:..|..:..||...|..:|:.|
  Rat   264 GFTVDSLARLCVLDDITVSPSEKHQ 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8800	NP_610483.1	PPP1R42	37..180	CDD:411060	40/163 (25%)
		leucine-rich repeat	50..71	CDD:275380	5/20 (25%)
		leucine-rich repeat	95..116	CDD:275380	5/20 (25%)
		leucine-rich repeat	117..141	CDD:275380	8/30 (27%)
Lrrc43	NP_001163867.1	LRR_RI	<146..254	CDD:238064	30/121 (25%)
		LRR_8	146..203	CDD:290566	17/59 (29%)
		LRR_4	146..187	CDD:289563	13/43 (30%)
		leucine-rich repeat	147..168	CDD:275378	5/20 (25%)
		leucine-rich repeat	169..192	CDD:275378	8/25 (32%)
		LRR_8	191..256	CDD:290566	19/75 (25%)
		leucine-rich repeat	193..219	CDD:275378	10/36 (28%)
		leucine-rich repeat	220..245	CDD:275378	4/24 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0531
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900