DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG8800 and Lrrc43

Sequence 1:NP_610483.1 Gene:CG8800 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001163867.1 Gene:Lrrc43 RGDID:1561461 Length:681 Species:Rattus norvegicus

Alignment Length:220 Identity:54/221 (24%)
Similarity:89/221 (40%) Gaps:57/221 (26%)


  Fly     1 MSKATTIKEALKRWEEREQQNSLTAK------------VIDLQFQWPPIEKMDSTLGTLVQCERI 53
            |.|.::.::...|  |...||.||.|            |:|     ..:..:|..:...::.|.:
  Rat    93 MLKDSSAEDRFLR--ELAIQNPLTIKDTFFYSYFRCLRVVD-----KGVSLVDKEILKFLKLEEL 150

  Fly    54 SMSTNMIEKIFGLSGMKCLKVLSLSRNYIKQISGLEAVAE----TLEELWLSYNLIEKIKGLTGL 114
            .:|.|.|:.|...:....||||.|   |...|:.:|.:..    .|:.|.|.:|.:        |
  Rat   151 VLSANKIKDIDANNLPPTLKVLEL---YGNLIASMECLCSPPPPNLQHLGLGHNKL--------L 204

  Fly   115 KCLKVLYISNNLIKDWS-------EFNRLAEIES----------LEDLVVVGNPLSEGLDEPTWR 162
            ..|:.||:::|   :|.       .||.|.:::|          |..||:.||||:.   .|.:|
  Rat   205 GPLESLYVTSN---NWPLLVSLDLGFNDLTDLQSMILGLSTLKCLRLLVLQGNPLAL---VPYYR 263

  Fly   163 AECIKRLPTIRKLDGEPVVLNEEPQ 187
            ...:..|..:..||...|..:|:.|
  Rat   264 GFTVDSLARLCVLDDITVSPSEKHQ 288

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG8800NP_610483.1 LRR_9 14..184 CDD:317038 49/203 (24%)
leucine-rich repeat 50..71 CDD:275380 5/21 (24%)
leucine-rich repeat 95..116 CDD:275380 5/21 (24%)
leucine-rich repeat 117..141 CDD:275380 8/31 (26%)
Lrrc43NP_001163867.1 LRR_RI <146..254 CDD:238064 31/122 (25%)
LRR_8 146..203 CDD:290566 17/60 (28%)
LRR_4 146..187 CDD:289563 13/44 (30%)
leucine-rich repeat 147..168 CDD:275378 5/21 (24%)
leucine-rich repeat 169..192 CDD:275378 8/26 (31%)
LRR_8 191..256 CDD:290566 20/76 (26%)
leucine-rich repeat 193..219 CDD:275378 10/37 (27%)
leucine-rich repeat 220..245 CDD:275378 4/25 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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