DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG8800 and C06A8.6

Sequence 1:NP_610483.1 Gene:CG8800 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_495634.1 Gene:C06A8.6 WormBaseID:WBGene00015516 Length:349 Species:Caenorhabditis elegans

Alignment Length:199 Identity:54/200 (27%)
Similarity:87/200 (44%) Gaps:40/200 (20%)


  Fly     2 SKATTIK--EALKRWEEREQQNSLTAKVIDLQFQWPPIEKMDSTLGTLVQCERISMSTNMIEKIF 64
            :|.|.|:  :.|...|..|..::..||          ||.:|:.|    :.:|:.:..|.|..|.
 Worm   130 NKITKIEGLDTLTELEYLELGDNRIAK----------IENLDNNL----KLDRLFLGANQIRLIE 180

  Fly    65 GLSGMKCLKVLSLSRN---YIKQISGLEAVAE------------------TLEELWLSYNLIEKI 108
            .:..:|.|.||||..|   .:..||||..:.|                  .||.|..:.|.:||:
 Worm   181 NVDHLKKLTVLSLPANAITVVDNISGLHNLKEIYLAQNGIKYVCGIDEHLPLEILDFNQNRLEKV 245

  Fly   109 KGLTGLKCLKVLYISNNLIKDWSEFNRLAEIESLEDLVVVGNPLSEGLDEPTWRAECIKRLPTIR 173
            :.:..||.|...:...|.:.:||..:.|.|:..|..:.:..||:: .:|  |:|.:.|..|..|.
 Worm   246 ENIHQLKTLTDFWARGNKLDNWSIMDELVELPQLNSVYLDFNPIA-SVD--TYRGKVIHLLQQIT 307

  Fly   174 KLDG 177
            :|||
 Worm   308 RLDG 311

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG8800NP_610483.1 LRR_9 14..184 CDD:317038 50/186 (27%)
leucine-rich repeat 50..71 CDD:275380 5/21 (24%)
leucine-rich repeat 95..116 CDD:275380 8/21 (38%)
leucine-rich repeat 117..141 CDD:275380 6/24 (25%)
C06A8.6NP_495634.1 leucine-rich repeat 35..55 CDD:275380
leucine-rich repeat 56..77 CDD:275380
LRR_4 76..118 CDD:289563
leucine-rich repeat 78..99 CDD:275380
LRR_RI <94..242 CDD:238064 32/126 (25%)
LRR_8 99..154 CDD:290566 6/24 (25%)
LRR_4 99..138 CDD:289563 3/8 (38%)
leucine-rich repeat 100..121 CDD:275380
LRR_4 120..162 CDD:289563 11/42 (26%)
leucine-rich repeat 122..143 CDD:275380 4/13 (31%)
leucine-rich repeat 144..165 CDD:275380 8/35 (23%)
leucine-rich repeat 166..187 CDD:275380 5/21 (24%)
leucine-rich repeat 188..209 CDD:275380 10/21 (48%)
leucine-rich repeat 210..230 CDD:275380 1/20 (5%)
leucine-rich repeat 232..278 CDD:275380 14/46 (30%)
LRRcap 293..310 CDD:197729 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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