DRSC/TRiP Functional Genomics Resources

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Protein Alignment hig and c4bpa

DIOPT Version :10

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_012819516.1 Gene:c4bpa / 733533 XenbaseID:XB-GENE-1014581 Length:482 Species:Xenopus tropicalis


Alignment Length:293 Identity:83/293 - (28%)
Similarity:112/293 - (38%) Gaps:62/293 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   692 TFTCTSPRGLTNSIAVVVATSTCPQLTEPLAPLKLRLEGN--------------KLGQRAHYECP 742
            |.||     |:||      |.:.|.:.     .|||..||              ..|...:|.|.
 Frog    71 TITC-----LSNS------TWSTPDVF-----CKLRSCGNPGDTLNGEFHAEDFNFGSVVNYTCN 119

  Fly   743 EGFRLDGAWN-ATCLASGNWSSPTPTCHAIQCPRLELDDPHLSLIELNTS---------AWGRAV 797
            .|:.:...:| ..|...|.||:..|.|.|..|      .|..::  ||.|         ......
 Frog   120 VGYNMISKFNYRICQTDGTWSNAVPQCEAQIC------SPPENI--LNGSFNPTKDEYYYQDSVT 176

  Fly   798 FKCQWGFKLTGPAQLDCEPSGVWSGPVPRCKVIQCVMPVAPLNGRIGGTSLSQRRLTVGALVTFS 862
            :||.....|.|.:.:.|...|.||..||.||.:.|..|..|.:.|:.|.|   ...|:.:.:||.
 Frog   177 YKCINNLVLVGKSSMFCTEFGNWSSAVPHCKGVNCANPDVPNSKRLSGFS---GPYTLNSAITFK 238

  Fly   863 CNDGHSLVGESSIICTENGQWSHSPPFCKSQCPYPGDPPNGLIAPLK------FNYDAGDYLSVQ 921
            ||||..:.|:|:|.|..:.||..|.|.|..:|   |.||:.|.|.||      ..:.:|..:...
 Frog   239 CNDGFDIFGQSTIECNIDSQWEPSLPQCLGRC---GSPPSLLYAELKPDFVDQKTFSSGAEVQYA 300

  Fly   922 CRPGFVQSYEGPPERPKCQPDGRWSGPMPKCKS 954
            |..|: ....|......|. |..||.|...|.|
 Frog   301 CLIGY-NPISGKNSTIICH-DATWSTPDVFCTS 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 Ig_3 612..696 CDD:464046 2/3 (67%)
PHA02927 705..952 CDD:222943 75/276 (27%)
c4bpaXP_012819516.1 PHA02927 30..267 CDD:222943 63/222 (28%)
CCP 334..389 CDD:153056
CCP 397..452 CDD:153056
Blue background indicates that the domain is not in the aligned region.

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