DRSC/TRiP Functional Genomics Resources

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Protein Alignment hig and svep1

DIOPT Version :10

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_001429572.1 Gene:svep1 / 567357 ZFINID:ZDB-GENE-110726-1 Length:3615 Species:Danio rerio


Alignment Length:777 Identity:171/777 - (22%)
Similarity:262/777 - (33%) Gaps:238/777 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 PKEDELELDHPETAAAHHRRRG---DSHAAELDQRD----RSPRWRRRRSTEFKGDLGQLPPESG 355
            |:...::...|.....|...||   ||...||...:    ...|..|...::...|...:..:..
Zfish  2319 PRCSPVQCPEPPLEENHLVLRGLDSDSGTVELSCEEGYVLHGARTLRCTPSQEWNDSFPVCKQVF 2383

  Fly   356 IGPEPEPLADQDLKDLQQYGNQSSSARVALLWQRVKRKSG----KTTGALSRPK----------- 405
            .||.|| :|..|..|.|.|  ..|....:.:.....||.|    :..|..|:|.           
Zfish  2384 CGPPPE-VAFGDPSDTQSY--FGSVVTYSCMDGFTLRKEGSVHCQANGNWSKPYPQCIPVECPHP 2445

  Fly   406 ---GGGDSSSKTTSRKDKGIYDEEAGYTPIHPDDPEFDEEEEEDEEVDILQQFTEVSEIRFPGEI 467
               ..|....:........:|..:|||                    |||...|           
Zfish  2446 EDIPNGIVDVQGLMYLSTAVYSCKAGY--------------------DILGNST----------- 2479

  Fly   468 GPMGDRRLCKIRC-VKGKWVGPL-------CATNEEDDNGNVKFQPLYKSCHVNRIPSHLLLSYR 524
                      :.| ..|:|:|.:       ||..:|..||:|::..|..|..:...         
Zfish  2480 ----------VLCGQSGQWIGGIPVCHPVKCAAPKEIPNGSVRYSKLQFSQSITYF--------- 2525

  Fly   525 NISVTPIPPNRGWRKTRLSKSTLLSNTEINVGWD----------------LPHGHSLQARCQELG 573
                    ..||:|.......|.|.|.:    ||                :.:|. ::.|.::.|
Zfish  2526 --------CQRGYRIQGPETLTCLENGQ----WDQEAPTCVPIYCSPPKPIDNGF-VEGRDRKFG 2577

  Fly   574 I---------YKLLGESRVLCSNGLWAPRMPSCV-------PTTVLTNYSE--------DSAPSI 614
            :         :.|:|.:.:.|.:..|:...|.||       |.....:||:        |...|.
Zfish  2578 VTIFYSCFPGFLLVGNNHLTCEDHGWSSSEPKCVLADCGLPPHIDFGDYSKVQELSAEYDMVTSQ 2642

  Fly   615 RIKIFNGSHSFEPSGVMAVPPHS------TVLMDCMYPRVRGTPEWSWT---------------- 657
            ::.:.|   ||....::....||      .:::.|   |..||  |:.|                
Zfish  2643 QLPVDN---SFLHGSLVKYHCHSGYEINGAIMLMC---REDGT--WNGTAPMCTPAQCEAPPSPE 2699

  Fly   658 --SWYMQYSTGWSPAQEEKAVRYRLSIKNIENNDSG-----------TFTCTSPRGLTNSIAVVV 709
              |..:..|...|.|:...|..|.|:.:.|....||           ..:|.:|.|:.|      
Zfish  2700 NGSVMVTDSALGSLAEYSCAEGYELNGQTIRQCISGQQWSDDAPRCLPISCGNPGGIAN------ 2758

  Fly   710 ATSTCPQLTEPLAPLKLRLEGNKLG------QRAHYECPEGFRLDGAWNATCLASGNWSSPTPTC 768
                                |..:|      :..||||..||.|:|....||...|.|.:..|.|
Zfish  2759 --------------------GEVIGKSFHFKELIHYECHSGFVLEGVETRTCQVDGKWDNKAPLC 2803

  Fly   769 HAIQCPRLELDDPHLS---LIELNTSAWG-RAVFKCQWGFKLTGPAQLDCEPSGVWSGPVPRCKV 829
            ..:.|.|     |.:|   |:..:...:| |.:|.|..||.|.|...:.|..:|.|:...|:|..
Zfish  2804 KEVSCGR-----PVVSKDVLVRGDDHTFGKRLLFSCNLGFILLGAPTIVCLANGSWNEVPPKCLP 2863

  Fly   830 IQCVMPVAPLNGRIGGTSLSQRRLTVGALVTFSCNDGHSLVGESSIICTENGQWSHSPPFCK-SQ 893
            ..|..|.:..|||:.||...     ...:|.::|:.|:.|.|..::||..:|.|...||.|. ..
Zfish  2864 ANCGQPPSIENGRVTGTDYG-----YNGMVRYACDIGYVLTGNPTLICRADGLWDDPPPRCDIIT 2923

  Fly   894 CPYPGDPPNGLIAPLKFNYDAGDYLSVQCRPGFVQSYE--GPPERPKCQPDGRWSGPMPKCK 953
            |..|.|..:|.:....||:|  |.:...|.||    ||  |.|.. :|..:|.|.|.:|:|:
Zfish  2924 CDPPEDISHGYLNGSSFNFD--DIVEYICFPG----YEVVGSPIL-RCAAEGVWLGQVPECR 2978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 Ig_3 612..696 CDD:464046 22/118 (19%)
PHA02927 705..952 CDD:222943 73/259 (28%)
svep1NP_001429572.1 None

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