DRSC/TRiP Functional Genomics Resources

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Protein Alignment hig and rca2.1

DIOPT Version :10

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_005162222.1 Gene:rca2.1 / 541367 ZFINID:ZDB-GENE-050320-60 Length:415 Species:Danio rerio


Alignment Length:361 Identity:85/361 - (23%)
Similarity:135/361 - (37%) Gaps:74/361 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   631 MAVPPHSTVLM------DCMYPRVRGTPEWSWTSWYMQYSTGWSPAQEEKAVRYRLSIKNIENND 689
            :||...|.:||      :|..|        |:.|..:..|..:||.|            .:.:..
Zfish     8 LAVALFSCLLMCTHVQGECTLP--------SFESRNVVLSGSYSPGQ------------TLPDGS 52

  Fly   690 SGTFTCTSPRGLTNSIAVVVATSTCPQLTEPLAPLKLRLEGNKLGQ-----RAHYE--------- 740
            :.||.|.|.....:|.|....|.|..|.|:    |.|..:....|.     ...||         
Zfish    53 ALTFECLSGHTPVDSRATKSITCTKSQWTD----LGLSCKKKSCGSPPEIVNGRYEISGILFGDT 113

  Fly   741 ----CPEGFRLDG-AWNATCLASGNWSSPTPTCHAIQC---PRLE----LDDPHLSLIELNTSAW 793
                |..|:.|.| ..:......|.|....|.|..::|   |.:|    .|:|      |.:..:
Zfish   114 IKPICNTGYMLVGYGLDQRVCRDGGWDGRDPECEVVKCAAPPSIENGQLSDEP------LESYEY 172

  Fly   794 GRAV-FKCQWGFKLTGPAQLDCEPSGVWSGPVPRCKVIQCVMPVAPLNGRIGGTSLSQRRLTVGA 857
            .:.| ::|..||.|:|.:.|.|...|.:....|:| :..|..|..|...||||.|...:   :|.
Zfish   173 SQVVTYRCNSGFSLSGSSNLHCSDDGTFKPDPPKC-LDGCPKPEIPHAIRIGGRSPPYK---IGH 233

  Fly   858 LVTFSCNDGHSLVGESSIICTENGQWSHSPPFCKSQCPYPGDPPNGLIAPLKFN----YDAGDYL 918
            .:.:.|.|.::|.|...|.|...| |...||.|...|..|....|..:.. :|:    :..||.:
Zfish   234 FIEYKCEDLYTLKGIKEIACRAGG-WDPEPPKCIEPCRVPNFGGNVTLRE-EFSSKDLFPHGDKV 296

  Fly   919 SVQCRPGFVQSYEGPPERPKCQPDGRWSGPMPKCKS 954
            :.:|:.|: :..:....|.....:.:|:..:..||:
Zfish   297 AFKCKSGY-EPVDSTVSRIATCEETKWTKLLLTCKA 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 Ig_3 612..696 CDD:464046 15/70 (21%)
PHA02927 705..952 CDD:222943 65/277 (23%)
rca2.1XP_005162222.1 PHA02927 15..266 CDD:222943 69/285 (24%)
CCP <285..330 CDD:153056 6/45 (13%)

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