DRSC/TRiP Functional Genomics Resources

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Protein Alignment hig and CSMD3

DIOPT Version :10

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_937756.1 Gene:CSMD3 / 114788 HGNCID:19291 Length:3707 Species:Homo sapiens


Alignment Length:664 Identity:162/664 - (24%)
Similarity:237/664 - (35%) Gaps:195/664 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 FDEEEEEDEEVDILQQFTEVSEIRFPGEIGPMGDRRLCKIRCVKG-----KWVGPLCATNEEDDN 498
            |.|..:.::|.|:||.: :...|:.|..|...||..........|     :|         ..|:
Human  2499 FVEFFQTEKEFDVLQVY-DGPNIQSPVLISLSGDYSSAFNITSNGHEVFLQW---------SADH 2553

  Fly   499 GNVK--FQPLYKS--CHVNRIPSH-LLLSYRN---ISVTPIPPNRGWRKTRLSKSTLLSNTEINV 555
            ||.|  |:..|.:  |.....|.| .::|...   .||.....:||:|....|.:....::....
Human  2554 GNNKKGFRIRYIAFYCSTPESPPHGYIISQTGGQLNSVVRWACDRGFRLVGKSSAVCRKSSYGYH 2618

  Fly   556 GWDLPHGHSLQARCQEL--GIYK------------LLGESRV------------------LC-SN 587
            .||.|     ...||.:  ||.|            |:| :||                  :| |:
Human  2619 AWDAP-----VPACQAISCGIPKAPTNGGILTTDYLVG-TRVTYFCNDGYRLSSKELTTAVCQSD 2677

  Fly   588 GLWA--PRMPSCVPTTVLTNYSEDSAPSI--------RIKIFNGSH---------SFEPSGVMAV 633
            |.|:  .:.|.||..|         .|||        |.:|.||||         |.:| |...:
Human  2678 GTWSNHNKTPRCVVVT---------CPSINSFILEHGRWRIVNGSHYEYKTKVVFSCDP-GYHGL 2732

  Fly   634 PPHSTVLMDCMYPRVRGTPEWSWTSW--YMQ---------------------------------- 662
            .|.|   ::|:   ..||  |||.:.  |.|                                  
Human  2733 GPAS---IECL---PNGT--WSWRNERPYCQIISCGELPTPPNGNKIGTQTSYGSTAIFTCDLGF 2789

  Fly   663 ----------YSTG-WSPAQ----------EEKAVRYRLSIKNIENNDSGTFTCTSPRGLTNSIA 706
                      .|:| ||.::          .|..|..::..:|....|:..:.|.....|..|  
Human  2790 MLVGSAVRECLSSGLWSESETRCLAGHCGIPELIVNGQVIGENYGYRDTVVYQCNPGFRLIGS-- 2852

  Fly   707 VVVATSTCPQ---------------LTEPLAPLKLRLEGN--KLGQRAHYECPEGFRLDGAWNAT 754
               :...|.|               ...|.:|:..|..||  .......:.|..|:.:.|...|.
Human  2853 ---SVRICQQDHNWSGQLPSCVPVSCGHPGSPIYGRTSGNGFNFNDVVTFSCNIGYLMQGPTKAQ 2914

  Fly   755 CLASGNWSSPTPTCHAIQC--PRLELDDPHLSLIELNTSAWGRAVF-KCQWGFKLTGPAQLDCEP 816
            |.|:..||.|.|.|..:.|  |.:..:....|.||.....:|..|| .|..|:.|.|.:.|.|:|
Human  2915 CQANRQWSHPPPMCKVVNCSDPGIPANSKRESKIEHGNFTYGTVVFYDCNPGYFLFGSSVLICQP 2979

  Fly   817 SGVWSGPVPRCKVIQCVMPVAPLNGRIGGTSLSQRRLTVGALVTFSCNDGHSLVGESSIICTENG 881
            :|.|..|:|.|.:|.|..|..|.|..:.|     .:.|.|:.|.:||....||:|:||..|..||
Human  2980 NGQWDKPLPECIMIDCGHPGVPPNAVLSG-----EKYTFGSTVHYSCTGKRSLLGQSSRTCQLNG 3039

  Fly   882 QWSHSPPFCKSQ----CPYPGDPPNGLIAPLKFNYDAGDYLSVQCRPGFVQSYEGPPERPKCQPD 942
            .||.|.|.|...    |..||.|.:|  :..:.|:.....:...|..|::  ..|..|| .|..:
Human  3040 HWSGSQPHCSGDATGTCGDPGTPGHG--SRQESNFRTKSTVRYACDTGYI--LHGSEER-TCLAN 3099

  Fly   943 GRWSGPMPKCKSYE 956
            |.|:|..|:||:.:
Human  3100 GSWTGRQPECKAVQ 3113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 Ig_3 612..696 CDD:464046 30/157 (19%)
PHA02927 705..952 CDD:222943 78/270 (29%)
CSMD3NP_937756.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
CUB 65..171 CDD:238001
CCP 178..236 CDD:153056
CUB 257..343 CDD:238001
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..435
CCP 486..544 CDD:153056
CUB 548..656 CDD:238001
CCP 664..718 CDD:153056
CUB 721..828 CDD:238001
CCP 834..891 CDD:153056
CUB 895..1002 CDD:238001
CCP 1010..1063 CDD:214478
CUB 1067..1175 CDD:238001
CCP 1182..1238 CDD:153056
CUB 1241..1348 CDD:238001
CCP 1354..1411 CDD:153056
CUB 1414..1522 CDD:238001
CCP 1528..1585 CDD:153056
CUB 1588..1695 CDD:238001
CCP 1701..1758 CDD:214478
CUB 1762..1869 CDD:238001
CCP 1878..1936 CDD:153056
CUB 1939..2046 CDD:238001
CCP 2052..2107 CDD:153056
CUB 2111..2218 CDD:238001
CCP 2224..2280 CDD:153056
CUB 2283..2389 CDD:238001
CCP 2395..2453 CDD:153056
CUB 2460..2566 CDD:238001 19/76 (25%)
CCP 2569..2628 CDD:153056 13/63 (21%)
PHA02927 2627..2871 CDD:222943 52/267 (19%)
PHA02927 2756..2991 CDD:222943 48/239 (20%)
PHA02927 2928..3168 CDD:222943 63/196 (32%)
PHA02927 3168..3407 CDD:222943
CCP 3411..3467 CDD:153056
Blue background indicates that the domain is not in the aligned region.

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