DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaAC45 and atp6ap1lb

DIOPT Version :10

Sequence 1:NP_610470.1 Gene:VhaAC45 / 35944 FlyBaseID:FBgn0262515 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001188332.1 Gene:atp6ap1lb / 561786 ZFINID:ZDB-GENE-050208-117 Length:333 Species:Danio rerio


Alignment Length:242 Identity:55/242 - (22%)
Similarity:98/242 - (40%) Gaps:65/242 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 QRRTRRDTAATTGG---------------IMWKSTNQFQIFYTALLYNGNPITVTDL--KLTNSS 227
            |.||:|....:|..               |::|:..      .|:.|..|  |..||  ::..||
Zfish    85 QPRTKRKLLQSTSSGPYSPLTVAYNGKICILFKAKR------LAIRYRNN--TFLDLTERVFGSS 141

  Fly   228 S---------TKLSVVMDTSVAD----KPI--------TFDVVYNGGYFSLSNLVYDNN-----N 266
            :         ||....:...:.|    |.:        ||.......:|:|.::....|     .
Zfish   142 AQVDTKGSVCTKEKATLSLRLGDVEDIKGLVIRLQMSNTFYESVGQNWFTLDSVHIHYNWTHEAT 206

  Fly   267 FRSSGVNAPTTFSYSCGNLT----LESAAVNNMYNT------LSFKSLQLQAPFDGTYKEDFPFG 321
            |.::.|.||.|:||.|.:::    .::..|.:.|..      ::|...|:|| |:   .:...|.
Zfish   207 FNATEVYAPATYSYHCQHVSSLQKYDTLLVPSSYTDSSANWHITFTDFQIQA-FN---VQSNKFA 267

  Fly   322 DSWDCVGFVTPGILMGLFVVALLLVIMFVGVCWMMDINTMDRFDDPK 368
            .:.||..|.||.|||||....:||:::...:..::.:..:||:::.|
Zfish   268 SASDCATFFTPAILMGLITSLILLLVLAYALHMVVHLKHIDRYEEHK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC45NP_610470.1 Lamp 211..309 CDD:480752 29/135 (21%)
Ac45-VOA1_TM 328..366 CDD:466669 12/37 (32%)
atp6ap1lbNP_001188332.1 VAS1_LD 113..259 CDD:461752 33/154 (21%)
Ac45-VOA1_TM 274..311 CDD:466669 12/36 (33%)

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