DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaAC45 and atp6ap1.2

DIOPT Version :10

Sequence 1:NP_610470.1 Gene:VhaAC45 / 35944 FlyBaseID:FBgn0262515 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001123842.1 Gene:atp6ap1.2 / 100170603 XenbaseID:XB-GENE-997187 Length:455 Species:Xenopus tropicalis


Alignment Length:467 Identity:112/467 - (23%)
Similarity:182/467 - (38%) Gaps:114/467 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WKSLIALCVIG---AAVAEQTPVFLWGANSV---AKPSLKT---VSQVEFAEQLAALLE--DHMV 56
            |..|..|.::|   ||.::|.||.||.:.|.   ::||:.:   .:..|....|...|.  ...:
 Frog     4 WALLSLLFLVGLFPAAPSQQVPVLLWSSESSVWNSQPSIHSGHIATDTELQRYLGPALTKGPRNL 68

  Fly    57 VAFEENGLSSKDF-----LCSNSQAQSCYAQLQGV---SPKT-------YYTSVENPSEALRSVA 106
            :.|.::.||.:||     :..|.| .|.:..||.:   ||.:       :|.:...|:.....:.
 Frog    69 LLFFQDKLSIEDFTAFAGVYGNKQ-DSAFPNLQSIVESSPSSLVLPSVDWYAANMLPTYLKERLG 132

  Fly   107 AKREHNSIDASGKL------TTPAKC------------------------AVG------------ 129
            ....|  :|.|..:      |.|:..                        |:|            
 Frog   133 VSPLH--VDQSTLMELKLNETVPSLLVVRLPYGSSSGLLAAKDVLRANDQAIGQVLSTLKSEGVP 195

  Fly   130 -TALFVTFEDAAESREASLESHDAAIAAISKQFECKVAYLYLAAPSTA-PVVQRRTRRDTAATTG 192
             |||......:...:||||     |:..:.:|.      |..|.|:.: |.|...:.|:|..   
 Frog   196 YTALLTALRPSRVIKEASL-----AVGNLGRQL------LATAQPTPSYPPVAFNSSRNTPC--- 246

  Fly   193 GIMWKSTN------QFQIFYTALLYNGNPITVTDLKLTNSSSTKLSVVMDTSVADKPITFDVVYN 251
             |::.:||      ..|:..|...:..:.:.:|. .|.|..::.|::....:|...|:|.....|
 Frog   247 -ILFWATNVSVTVDDVQVDLTDQTFTASNLDLTG-SLCNDINSVLAITYKEAVKGNPLTLRFFLN 309

  Fly   252 GGYFSLS----------NLVYDNN--NFRSSGVNAPTTFSYSCGNL----TLESAAVNNMYNTLS 300
            ..::.:|          .::|..|  .|.:..||||:.:|:.|..:    |..|..|:|......
 Frog   310 RRFYPVSARFWFTLSQVEIIYSGNTATFLAPQVNAPSNYSFHCQYISSWPTFGSVLVSNTSKNSP 374

  Fly   301 FKSLQLQ-APF--DGTYKEDFPFGDSWDCVGFVTPGILMGLFVVALLLVIMFVGVCWMMDINTMD 362
            ....||. |.|  .|.......|..:.||.||.:|||.|||....|.:.|:..|:..:|.:.|||
 Frog   375 ASKWQLHIAEFQIQGFNVTGMAFSYASDCAGFFSPGIWMGLITTLLFVFILTYGLHMVMSLKTMD 439

  Fly   363 RFDDPKGKTITI 374
            |||||||.:|.:
 Frog   440 RFDDPKGPSIAV 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC45NP_610470.1 Lamp 211..309 CDD:480752 24/114 (21%)
Ac45-VOA1_TM 328..366 CDD:466669 17/37 (46%)
atp6ap1.2NP_001123842.1 VAS1_LD 244..390 CDD:461752 32/150 (21%)
Ac45-VOA1_TM 405..443 CDD:466669 17/37 (46%)

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