DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and HB5

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_201334.1 Gene:HB5 / 836656 AraportID:AT5G65310 Length:312 Species:Arabidopsis thaliana


Alignment Length:176 Identity:50/176 - (28%)
Similarity:80/176 - (45%) Gaps:31/176 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 NGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAK 341
            :||...|...|..:|:|  |..:.||:|       .:||.:..::||...  ||:..||:.|...
plant    38 SGAGDYSQMFDALEDDG--SLEDLGGVG-------HASSTAAEKKRRLGV--EQVKALEKNFEID 91

  Fly   342 KYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVN 406
            ..|....:.::|..|.|...||.||||||||:|| .|.....:|:.::                |
plant    92 NKLEPERKVKLAQELGLQPRQVAIWFQNRRARWK-TKQLERDYGVLKS----------------N 139

  Fly   407 RFAVRSQHQQLEK--MCLSGPKPDLRKKLSAEAIGGFEKFSGSTNA 450
            ..|::.....|::  ..|.|...:|:.||:.|.:.|.|: :|:..|
plant   140 FDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEE-NGALKA 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 20/51 (39%)
HB5NP_201334.1 Homeodomain 72..125 CDD:459649 21/54 (39%)
HALZ 127..168 CDD:460477 8/56 (14%)

Return to query results.
Submit another query.