DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and HB17

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_178252.2 Gene:HB17 / 814671 AraportID:AT2G01430 Length:275 Species:Arabidopsis thaliana


Alignment Length:208 Identity:45/208 - (21%)
Similarity:72/208 - (34%) Gaps:82/208 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 DSCSDISLTMSPRNYNG---------------EMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGM 303
            ::.|::.||:|...::.               .:|.:|..:..:.|.|:.|.|:|          
plant    79 ENSSNLDLTISVPGFSSSPLSDEGSGGGRDQLRLDMNRLPSSEDGDDEEFSHDDG---------- 133

  Fly   304 GGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQ 368
                         |...|::...|.||...||..|.....|:..::..:|..|.|...|:::|||
plant   134 -------------SAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQ 185

  Fly   369 NRRAK------------WKRVKAGLT--SHGLGRN---------GTT------------------ 392
            ||||:            .||....||  :|.|.|.         |.|                  
plant   186 NRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTVNSASSLTMCPRCERVT 250

  Fly   393 ---SGTKIVVPIP 402
               |.::.|||:|
plant   251 PAASPSRAVVPVP 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 18/63 (29%)
HB17NP_178252.2 HOX 136..192 CDD:197696 19/55 (35%)
HALZ 194..237 CDD:128634 9/42 (21%)

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