DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxa3a

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571609.2 Gene:hoxa3a / 58049 ZFINID:ZDB-GENE-000823-3 Length:410 Species:Danio rerio


Alignment Length:391 Identity:100/391 - (25%)
Similarity:147/391 - (37%) Gaps:129/391 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHAR---------LQHMAAAGRMHE------- 206
            ||:..|      ..|.|    :...|.|:.:|  ||.         ||....:..:|.       
Zfish    16 LPYQSA------NGLGY----DASQQQYLQAL--HAESEYHRPACSLQSPGISAGLHTSNEMSEV 68

  Fly   207 -DQANPGMAQL-------QEPTPPQAHSSPAK--------SGSHSPMEPALDVGMDEDFECSGDS 255
             .|.|...|.:       |.||.|...|||:.        |.:.:|:.                 
Zfish    69 CQQINGTQATVTDTSDNKQPPTAPSGPSSPSSLNQIPNIDSAAKNPVH----------------- 116

  Fly   256 CSDISLTMSPRNYNGE-MDKSRNGAYTNSDS----EDCSDDEGAQSRHEGGGMGGKDSQGNGSSS 315
               :|.|.|.|.:... |.:||......|.|    |.|:.|:...                ||::
Zfish   117 ---VSPTPSTRKHIFPWMKESRQNTKQKSCSIISVESCAGDKSPP----------------GSAA 162

  Fly   316 NSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAG 380
               |:|.|||:||.||:|||:|||..:||....|.::|..|.|:|.|:||||||||.|:|:.:.|
Zfish   163 ---SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKG 224

  Fly   381 -----------------LTSHGLGRNGTT--SGTKIVV-------PIPVHVNR-----FAVRSQH 414
                             |:|.|.|..|:.  |....:|       |.|...|:     :::.:.:
Zfish   225 LGMMPSPGAQSPHSPVSLSSGGGGGGGSAYLSSMHSLVNSVTYDSPSPASYNKPQSNTYSLPTSY 289

  Fly   415 QQLEKMCLSGPKPDLRKKLSAEAIGGFE--KFSGSTN-ASSPSGGPVGLGVGVGVG---VGVGLG 473
            ..|.. |   |.|..|.:.:..|...::  ...|:.| .:...|.||.:..|.|..   ||:|..
Zfish   290 PPLNN-C---PPPQKRYQGTGTATPEYDTHHIQGNNNYGTQVQGSPVYVSGGGGYSDSLVGMGAS 350

  Fly   474 V 474
            |
Zfish   351 V 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 29/51 (57%)
hoxa3aNP_571609.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..126 13/66 (20%)
Antp-type hexapeptide 127..132 0/4 (0%)
Homeodomain 164..220 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..249 4/26 (15%)
DUF4074 346..408 CDD:463833 3/6 (50%)

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