DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxa9a

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571607.2 Gene:hoxa9a / 58047 ZFINID:ZDB-GENE-000823-1 Length:250 Species:Danio rerio


Alignment Length:331 Identity:76/331 - (22%)
Similarity:110/331 - (33%) Gaps:143/331 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SSALGLTQFPLYNPWLHGYFAQNHERLTHLIA-----GGCYLP-------SSPAGH--------- 117
            ||.|||.|                .|.|.|.|     |.|..|       :|..||         
Zfish    26 SSGLGLIQ----------------HRPTILPADLSDLGPCTFPAKQPVYGTSDWGHIPTHFSTGV 74

  Fly   118 PAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMN 182
            |:..||.||                   ||.:                                 
Zfish    75 PSVYQPHAQ-------------------PPVV--------------------------------- 87

  Fly   183 QDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDE 247
            .|||.|..:.      :|.|             |.:..||..:.:.|||.::.            
Zfish    88 GDYVQSWLLD------SACG-------------LPQTEPPTVNHNHAKSDTNE------------ 121

  Fly   248 DFECSGDSCSDIS--LTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGK-DSQ 309
                :.|..::.|  ..:.|.            .:||......::.|.:::..:.|.:.|| .:.
Zfish   122 ----TNDDGTEYSPHTILQPE------------VFTNGGCSTKTEAESSRTAEKSGDIEGKPGAD 170

  Fly   310 GNGSSSN----SKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNR 370
            .....||    |.:|::|..:|..|:||||:||....||:...|.::|..|.|:|.|||||||||
Zfish   171 PENPVSNWLHASSTRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNR 235

  Fly   371 RAKWKR 376
            |.|.|:
Zfish   236 RMKMKK 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 26/51 (51%)
hoxa9aNP_571607.2 Hox9_act 1..171 CDD:461369 44/259 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 105..177 14/99 (14%)
Homeodomain 185..241 CDD:459649 28/55 (51%)

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