DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and pb

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_061500970.1 Gene:pb / 5667717 VectorBaseID:AGAMI1_011971 Length:790 Species:Anopheles gambiae


Alignment Length:194 Identity:42/194 - (21%)
Similarity:68/194 - (35%) Gaps:39/194 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   466 ALITVFILSKYVP--------RGEGSRAAAGARSRSKLKADTEDADQQSGAA---ATTG-SGRKD 518
            |||| .|..:..|        |.:..:|.|.|.::||.......|..:.|::   |.|| :.||.
Mosquito  1028 ALIT-SIFGELTPENKKRIEDRIKKQQAKAKADAQSKPSTKPPAAPPKGGSSPPPAPTGPAPRKP 1091

  Fly   519 ADAL--------MKQAGTAVAA-VVDTEPAGSNGSAAGIRYRGAENGRRSDVDSQHQIDNNNSAT 574
            ..:|        .:::|:|.|. :||.:.|..|.......|.||.....           ..|.:
Mosquito  1092 LISLPSRPPRGGKQRSGSAPAPNLVDEDSAARNREPDASAYDGASPSAW-----------KRSGS 1145

  Fly   575 INTTSTTTTNNTSAAATKSGPKLACERIKEKLEQETRNIEDFIDKTVTGFVELKDDLMRMPDET 638
            ....|.....:.|.:.::..|..:.:.|.....||:      :.|..:|.........|.|..|
Mosquito  1146 APAPSVVPRASASRSPSRKSPSPSHDGISPSTRQES------LSKKKSGSAPAPTPTSRGPFRT 1203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649
pbXP_061500970.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.