DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Awh

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster


Alignment Length:136 Identity:41/136 - (30%)
Similarity:59/136 - (43%) Gaps:23/136 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 GGKDSQGNGSSSN----SKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVK 364
            ||..|...|...:    ||::|.||.||.|||..|:..|.........:..:||:...||:...:
  Fly   129 GGTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 193

  Fly   365 IWFQNRRAKWKR-VKAGLTSHGLGRNGTTSGTKIVVP----IPVHVN-RFAVRSQHQQLEKMCLS 423
            :||||.||:.|: :.|       |:|      ||..|    ...|:| :.....|:.....|.|:
  Fly   194 VWFQNSRARQKKHIHA-------GKN------KIREPEGSSFARHINLQLTYSFQNNAQNPMHLN 245

  Fly   424 GPKPDL 429
            |.|..|
  Fly   246 GSKAGL 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 18/51 (35%)
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759
LIM2_AWH 69..123 CDD:188765
Homeodomain 149..205 CDD:459649 20/55 (36%)
Blue background indicates that the domain is not in the aligned region.

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