Protein Alignment unpg and Hoxd12

DIOPT Version :10

• Sequence 1: NP_477146.1
• Gene: unpg / 35942
• FlyBaseID: FBgn0015561
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001178832.1
• Gene: Hoxd12 / 366082
• RGDID: 1309797
• Length: 268
• Species: Rattus norvegicus
• Alignment Length: 303
• Identity: 76/303 - (25%)
• Similarity: 110/303 - (36%)
• Gaps: 86/303 - (28%)

  Fly    92 YFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQPPPPHPPTHA---------------- 140
            ||:......:.|.|    ||  |..:|.:..|.| |.|....|..||.|
  Rat    25 YFSNLRPNGSQLAA----LP--PISYPRSALPWA-ATPASCTPAQPTTASAFGGFSQPYLTGSGP 82

  Fly   141 LEKQLPPTLPHPLD-TRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRM 204
            :..|.|.|...|.| .:|  :.|.|| .|..:.|..|.........||| ::.......|..||
  Rat    83 IGLQSPGTKDGPEDQVKF--YTPDAA-TASEERSRTRPPFAPESSLVHS-ALKGTKYDFAGVGR- 142

  Fly   205 HEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYN 269
                |.||...|.:..|                             |:.:...|   |..|.|.|
  Rat   143 ----AAPGSVTLLQGAP-----------------------------CASNFKED---TKGPLNLN 171

  Fly   270 GEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLEL 334
            ..:..:...:...|...|              |:....:.|       ::|::|..:|.:|:.||
  Rat   172 MAVQVAGVASCLRSSLPD--------------GLPWGAAPG-------RARKKRKPYTKQQIAEL 215

  Fly   335 EREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRV 377
            |.||...::::..:|.:::..|.||:.||||||||||.|.|||
  Rat   216 ENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRV 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
unpg	NP_477146.1	Homeodomain	324..376	CDD:459649	22/51 (43%)
Hoxd12	NP_001178832.1	Homeodomain	201..257	CDD:459649	24/55 (44%)